Rhodococcus opacus PD630: Pd630_LPD01854
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Entry
Pd630_LPD01854 CDS
T03071
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pd630_LPD01854
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Pd630_LPD01854
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD01854
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Pd630_LPD01854
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AHK29083
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All DBs
Position
1947581..1948705
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AA seq
374 aa
AA seq
DB search
MILLLTGCSTAPSDRSAVDPAAREAAVEKAQGGAAELLDAGMHDNQWTGPENSPPPRPGL
RITLIPEQMASTGSSRPAKAIESEVKKLGWVPKISDGQGKPEVQLNALNTAVDEKVDAVI
LIFVDTTRVQSALQRALAAGVKVVTLGSLKNTPDTVPDVSFDWVRAGESVAQYAVWKSGG
DLGMLQMRNADLYIVVNGQYKGSQDSLDTPGNCPGCDVVTQDWSLATFEDPTIGPAAQAV
ATRLANPQLNWVSCFDSCLFRVSNGLNRAGFTDSVSGAGFDCNPENLDIIRAGGVQKVCF
ADPREWLAYAAIDNVNRMTNGLPAFDFTESIPVALFDKDSLSQLPPDRSAELETKGWQGN
FDFRAKFEQLWGIG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgattctcctgctgacgggctgctcgacagcaccttcggatcgatcggcagtcgacccg
gccgcacgggaggcggcggtggagaaagcacaaggcggcgcggccgaactcctcgacgca
ggaatgcacgacaaccagtggacgggaccggaaaacagcccgccgccccggccaggcctc
aggatcaccctcatcccggagcaaatggcctcgaccgggtcgagtcgaccggcgaaggcc
atcgaatcagaggtcaaaaagctcggctgggtaccgaagatctccgacggccagggcaag
ccggaggttcagctcaacgcactgaacacggctgtggacgagaaggtcgatgccgtcatc
ctcatcttcgtcgacaccacccgcgtccagtccgcgctccagcgtgcccttgcggcgggc
gtcaaggtggtcaccctcggatcactgaagaacacccccgacacggtcccggatgtgtcc
ttcgactgggtgcgtgccggagagtcggtcgcgcagtacgcggtgtggaagagcggcggc
gatctgggcatgctgcagatgcgcaacgccgacctgtacatcgtggtcaacggccagtac
aaaggctcgcaggacagcctcgacaccccggggaactgcccgggatgcgacgtcgtcacc
caggactggagtctggcgaccttcgaagatccgacgatcggccccgccgcacaagcggtg
gccaccagactggcgaacccccagctcaactgggtctcctgcttcgactcctgcctcttc
cgcgtcagcaacggcctcaaccgcgcagggttcaccgactccgtttccggcgccggcttc
gattgcaacccggagaacctggacatcattcgcgccggcggcgtgcagaaggtgtgcttc
gccgacccgcgagaatggttggcctacgcggcaattgacaacgtcaaccgcatgaccaac
ggcctgcccgcgttcgacttcaccgaatccatcccggtcgctttgttcgacaaggactcg
ctgtcccagctcccgccggaccggtcggccgaactcgaaaccaagggatggcagggcaac
ttcgacttccgcgcgaagttcgaacagctgtgggggatcggataa
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