Rhodococcus opacus PD630: Pd630_LPD02011
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Entry
Pd630_LPD02011 CDS
T03071
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roa03000
]
Pd630_LPD02011
Transcription factors [BR:
roa03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Pd630_LPD02011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg_3
HTH_AsnC-type
AsnC_trans_reg
HTH_24
Sigma70_r4
HTH_11
HTH_20
NirdL-like_HTH
HTH_28
EFG_IV
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AHK29238
LinkDB
All DBs
Position
complement(2122188..2122649)
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AA seq
153 aa
AA seq
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MSEQPASLDPVSKQIIEQLQEDGRRSYSAIGKVVGLSEAAVRQRVQKLIDTGVTQIVAVT
DPVQVGFSRQAMVGIRCTGDVTDIAARLADVDAIDYVVLTAGAYDILAEIVCENDDHLLT
VLNKEIRTIPGVLGTETMVYLKLVKQQYDWGTR
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcagcctgcctctctcgatcccgtgtccaagcagatcatcgagcaacttcag
gaggatggacggcggtcctactcggccatcggcaaggtcgtcggactgtcggaagcggct
gtacgccaacgcgtgcagaagctgatcgacaccggcgtcacgcagatcgtcgcggtcacc
gaccccgttcaagtgggattctcacgtcaggccatggtcggaatccgctgcaccggggac
gtcaccgacatcgccgcccggctcgccgacgtcgacgccatcgactacgtcgtgttgacg
gcaggcgcctacgacattctggccgagatcgtgtgcgagaacgacgaccacctcctgacc
gtgctcaacaaagaaattcgcactattcccggtgtgctcggcaccgagacgatggtgtac
ctgaaacttgtcaaacagcaatatgattggggaacccgatga
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