Rhodococcus opacus PD630: Pd630_LPD02439
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Entry
Pd630_LPD02439 CDS
T03071
Name
(GenBank) HTH-type transcriptional repressor KstR
KO
K22107
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roa03000
]
Pd630_LPD02439
Transcription factors [BR:
roa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Pd630_LPD02439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_20
TetR_N
HTH_Tnp_1_2
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AHK29661
LinkDB
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Position
2582251..2582844
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AA seq
197 aa
AA seq
DB search
MRDAAEPSSEEQRARHVRMLEAAIELATEKELARVQMHEVAKRAGVAIGTLYRYFPSKTH
LFVAVMVDQIDRMGAGFKKSAPPGESPQDAVYNVLVRATRGLLRRPALSTAMIQSTSTAN
VASVPDAGKVDRAFRQIMLDAAGIEHPTEEDLTALRLLVQLWFGVIQSCLNGRVSIPDAE
SDIRRACDLLLVNLSHR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgctgccgaaccgagttcggaggaacagcgggcccgccacgtccgcatgctc
gaggccgccatcgaactggccaccgagaaggaactcgcccgggtccagatgcacgaggtg
gccaaacgtgccggcgtcgcgatcgggacgctgtaccggtactttccgtcgaagacgcat
ctgttcgtcgcggtgatggtcgaccagatcgaccggatgggtgccgggttcaagaagagt
gcgccccccggcgaatcgccgcaggatgcggtgtacaacgtgctggtccgcgccacccgc
gggctgttgcgccggcccgcattgtccaccgcgatgatccagtccacgagcaccgccaac
gtcgcgtccgtgccggacgcggggaaggtcgaccgggcattccggcagatcatgctggac
gctgcggggatcgaacacccgaccgaggaagatctgacggcactgcgcctgctggtgcag
ctgtggttcggcgtcatccagtcctgcctcaacggccgggtgtcgattcccgatgccgag
tccgacatccgtagggcgtgtgacctgctgctggtcaacctgtcgcatcgctga
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