Rhodococcus opacus PD630: Pd630_LPD02501
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Entry
Pd630_LPD02501 CDS
T03071
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD02501
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pd630_LPD02501
Archaeal homologous recombinant proteins
Pd630_LPD02501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
EndA_linker
Motif
Other DBs
NCBI-ProteinID:
AHK29724
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Position
2647286..2648470
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AA seq
394 aa
AA seq
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MRILHTSDWHIGRTFHGVDLLTDQARVLDAIAALVAEHGVDVVVVPGDVYDRSIPSADAV
TVCNRGFEAIRDAGAVIVATSGNHDSAARLGAGAAFSRAGGLHLMTTVAGIGSPVVLEDA
HGPVAFYGIPYLEPEITRTQLDVPTARSHAEILDAAMDRVRTDLDRRNDTTPLTRSVVLA
HAFVVGAEATGSERSISVGGVETVSASAFGGVDYVALGHLHSPQTLAENIRYSGSPLPYS
FGERTHSKAVYLVDLDADGLRTVERVDLPVVRGLRQLTGTVQELLEDDTYRDAEDCYVSA
VLTDPERPVDAMRSLQTRFPFAVHLEWQRPEGGDDLRYRDKVHGRSDLQITRSFLTDVRS
EPSTGEIRLVEAALGFADRAGEDTAEVVALEQTA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctgcacacttcggactggcacatcggacgcacgttccacggggtggacctg
ctcaccgaccaggcccgtgtgctcgacgcgatcgccgccctcgtcgccgagcacggcgtg
gacgtcgtcgtcgttcccggtgacgtgtacgaccggtcgatccccagcgcggacgccgtc
accgtgtgcaaccgcggcttcgaagcgatccgggacgccggcgcggtgatcgtcgccacg
tccggcaaccacgactccgcggcgcggctcggggcgggtgccgcgttctcccgcgcgggc
gggctgcacctcatgacgacggtcgccggcatcggctcgcccgtcgtgctcgaggacgcg
cacggtcccgtcgcgttctacggcattccctatctcgagcccgagatcacccgcacgcaa
ctggacgtgccgaccgcgcggtcacacgccgagatcctcgacgccgcgatggaccgtgtc
cgcaccgacctcgacaggcggaacgacaccacaccgctcaccaggtccgtggtgctggcc
cacgcgttcgtggtgggagcggaggccaccgggtcggagaggtccatctccgtcggcggc
gtcgagacggtgtcggcttcggccttcggcggggtcgactacgtcgcgctcggccacctc
cactcgccgcagaccctcgcggagaacatccggtactcgggttcgccgctgccgtactcc
ttcggcgagcgcacccacagcaaggcggtctacctcgtggatctcgacgccgacggactg
cggaccgtcgagcgggtcgacctgccggtggtccgcggtctccgacaattgaccggcacg
gtgcaggagttgctcgaggacgacacgtaccgcgacgccgaggactgctacgtgtcagcg
gtgctcaccgacccggaacgcccggtcgacgccatgcgctcactccagacccgattcccg
ttcgccgttcacctcgagtggcaacgccccgagggcggcgacgatctgcgctaccgcgac
aaggtgcacgggcgcagcgatctgcagatcacgcgcagcttcctcaccgacgtgcgcagc
gaaccgtcgaccggcgagatccggctggtggaagctgcactcggcttcgccgaccgggcc
ggcgaagacaccgccgaggtcgtcgcgctggaacagacggcatga
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