Rhodococcus opacus PD630: Pd630_LPD02804
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Entry
Pd630_LPD02804 CDS
T03071
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pd630_LPD02804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD02804
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD02804
Enzymes [BR:
roa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pd630_LPD02804
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pd630_LPD02804
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pd630_LPD02804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHK30027
LinkDB
All DBs
Position
3006845..3007906
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLALKDSPASFDPTTVAGYDAATGTWSDTDAGSFGDAEGTEDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgacccacgctgaccgaagaggtcatcgctgacaaccgctcgaag
ttcgtcatcgagcccctcgagccaggcttcgggtacaccctcggcaactcgctccgtcgc
acgctcctttcgtcgattcccggcgctgctgtcaccagcatccgcatcgacggcgttctg
cacgagttcaccacagttcccggtgtgaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgcaagcag
ggccccggcgctgtgactgcaggcgacatcgtgcccccggccggcgtcaccgtgaacaac
ccggatctgcacatcgccaccctgaacgacaagggaaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgttcccgccgtccagaacaaggcgtccggcgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acccgcgtcgagcagcgcaccgacttcgatcggctcgtgctcgatgtggaaaccaagaac
tccatcaccgctcgggacgcgctcgcttcggcgggcaagaccctggttgagctcttcggc
ctggcccgtgagctgaacgtcgaagcagaaggcatcgagatcggaccctcgcccgccgag
gccgatcacattgcttcgttcggactgcccatcgaggacctggacctgacggtccgttcc
tacaactgcctcaagcgcgaaggtgttcacaccgtcggtgagcttgtcggccgtaccgag
tccgatctgctcgacatccgcaacttcggacagaagtccatcgacgaggtgaaggtcaag
ctgcattcgctcggcctggccctcaaggacagccccgcgtccttcgatcccaccaccgtt
gccggctacgacgccgccaccgggacgtggagcgacacggacgcaggttccttcggtgat
gccgagggcaccgaggactacgccgagaccgaacagctgtag
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