Rhodococcus opacus PD630: Pd630_LPD02897
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Entry
Pd630_LPD02897 CDS
T03071
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00020
Citrate cycle (TCA cycle)
roa00190
Oxidative phosphorylation
roa00650
Butanoate metabolism
roa00720
Other carbon fixation pathways
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01200
Carbon metabolism
Module
roa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
roa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
roa_M00149
Succinate dehydrogenase, prokaryotes
roa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pd630_LPD02897
00650 Butanoate metabolism
Pd630_LPD02897
09102 Energy metabolism
00190 Oxidative phosphorylation
Pd630_LPD02897
00720 Other carbon fixation pathways
Pd630_LPD02897
Enzymes [BR:
roa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Pd630_LPD02897
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
DUF6020
Motif
Other DBs
NCBI-ProteinID:
AHK30120
LinkDB
All DBs
Position
complement(3103733..3105484)
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAITETENGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHIPEEVLDEKLPDIMEFSRTYLGVDPVKEPVPVYPTCHYVMGGIP
TRINGEVLRNNDEIVQGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEHANN
SEFVDMPEAPEKMVDDWMATILSDHGHERVADIRSELQQSMDNNASVFRTEERLTQALED
VRALKERYNHITVQDKGKRYNSDLLEAVELGFLLEMAEVTVVGALNRKESRGGHAREDYP
DRNDAEYMKHTMAYKEGDGLLSEIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacaccgttatgacgtggtcatcgtcggcgccggcggcgccggcatgcgcgca
gcgatcgaggccggtccccgcgcccgcaccgcggtactgaccaagctctaccccacccgc
agccacaccggcgcggcccagggcggcatgtgcgccgcgctggcgaacgtggaggaagac
aactgggagtggcacaccttcgacacggtcaagggcggcgactacctcgccgaccaggac
gccgtcgagatcatggccaaggaggccatcgacgcggtgctcgacctcgagaagatgggt
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgtcgtttcggtggtcacacc
cgcgatcacggtaaggcccccgtgcgccgcgcatgttatgccgcggaccgcaccggtcac
atgatcctgcagacgctctaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgccctcgacatcgcgatcaccgagacggagaacggcccggtcgccaccggcgtc
atcgcctacgagctggccaccggcgagatccacgtcttccacgcgaagtccatcgtgttc
gccaccggcggctcgggacgcatgtacaagacgacgtccaacgcgcacaccctcaccggt
gacggcatgggcatcatcttccgcaagggccttccgctggaggacatggaattccaccag
ttccatcccacaggcctggccggactcggcatcctcatctccgaggccgtgcgcggtgag
ggcggcatcctccgtaacgccgacggcgaacggttcatggagcgctacgcccccaccatc
aaggacctcgccccccgtgacatcgtcgcgcggtcgatggtcctcgaggtcctcgaggga
cgcggcgcgggaccgaacaaggactacgtctacatcgacgtgacccacatccccgaggaa
gtcctcgacgagaagctccccgacatcatggagttctcccgcacctacctcggtgtggac
ccggtgaaggaaccggtgccggtgtaccccacctgccactacgtcatgggcggcatcccc
acccggatcaacggtgaggtcctgcgcaacaacgacgagatcgtccagggcctgtacgcc
gccggcgagtgcgcctgcgtctccgtccacggcgcgaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggacgccgcgccggcatcgccgccgccgagcacgccaacaac
agcgagttcgtcgacatgcccgaggcgcccgagaagatggtcgacgactggatggccacc
atcctgtcggaccacggtcacgagcgtgtcgcggacatccgcagcgagctgcagcagtcc
atggacaacaacgcctcggtgttccgtaccgaagagcgcctcacccaggccctcgaggac
gtgcgcgccctcaaggagcgctacaaccacatcacggtgcaggacaagggcaagcgctac
aacagcgacctgctcgaggccgtcgagctcggcttcctcctcgaaatggcggaggtcacc
gtcgtcggcgcgctgaaccgcaaggaatcgcgcggcggccacgcccgcgaggactacccg
gaccgcaacgacgccgagtacatgaagcacacgatggcatacaaggagggcgacggcctg
ctctccgaaatccgtctcgactacaagccggtagtccagacccgctacgagccgatggag
cgtaagtactga
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