Rhodococcus opacus PD630: Pd630_LPD03193
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Entry
Pd630_LPD03193 CDS
T03071
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Pd630_LPD03193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roa03019
]
Pd630_LPD03193
03009 Ribosome biogenesis [BR:
roa03009
]
Pd630_LPD03193
03036 Chromosome and associated proteins [BR:
roa03036
]
Pd630_LPD03193
Enzymes [BR:
roa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Pd630_LPD03193
Messenger RNA biogenesis [BR:
roa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pd630_LPD03193
Ribosome biogenesis [BR:
roa03009
]
Eukaryotic type
90S particles
RNase
Pd630_LPD03193
Prokaryotic type
rRNA processing factors
Pd630_LPD03193
Chromosome and associated proteins [BR:
roa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Pd630_LPD03193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AHK30412
LinkDB
All DBs
Position
3391085..3391843
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AA seq
252 aa
AA seq
DB search
MTSDISNTPAGGEEDHASLLAALGVEIEPSLLTLALTHRSYAYENGGLPTNERLEFLGDS
VLGVTVTEKLYLAHPDKSEGDLAKIRASIVNMHALAEVARTLGEGGLGAHLLLGKGEEMT
GGRDKPSILADGMESILGAIHLEHGIDTARRVVLDLFSDLLQRAPRLGAGLDWKTSLQEL
TAERGVGVPAYEITATGPDHDKEFTATVIIGGKPLGVGIGRSKKEAEQKAASTAWNALSD
AGPDVAADDVSA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagcgacatcagtaatacacccgccggcggcgaggaggatcatgcttccctcctc
gccgccctcggcgtagaaatcgagccttcgctgctcaccttggcgttgacgcaccgctcg
tatgcgtacgagaacggtggtctccccaccaacgagcgtctcgaatttctcggcgactcc
gtgctcggagtcaccgtgaccgagaagctttaccttgcgcatccggacaagtccgagggc
gatctcgcgaagatccgggcgagcatcgtcaacatgcacgcgctcgcggaggtggcccgc
actctcggtgaaggcggcctcggggcccatctcctgctcggtaagggcgaggagatgacc
ggtggccgtgacaagccgagcatcctggccgacggcatggagtcgattctcggcgccatc
cacctcgagcacggcatcgacacggcgcgacgcgtcgtactcgacctcttcagcgatctc
ctccagcgggccccccgtctcggtgcgggtctcgactggaagacgagtctgcaggagttg
accgcggagcgtggcgtcggcgtcccggcgtacgagatcaccgcgaccggcccggaccac
gacaaggaattcaccgccaccgtgatcatcggcggcaagcccctcggcgtcggtatcggc
cgctccaagaaagaggccgagcagaaggctgcgagcacggcgtggaatgcgttgtccgac
gcaggccccgacgtagcggccgacgacgtcagtgcctga
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