Rhodococcus opacus PD630: Pd630_LPD03309
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Entry
Pd630_LPD03309 CDS
T03071
Name
(GenBank) Transcription elongation protein nusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD03309
03009 Ribosome biogenesis [BR:
roa03009
]
Pd630_LPD03309
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pd630_LPD03309
Ribosome biogenesis [BR:
roa03009
]
Prokaryotic type
rRNA transcription factors
Pd630_LPD03309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
KH_2
S1
Motif
Other DBs
NCBI-ProteinID:
AHK30528
LinkDB
All DBs
Position
3499723..3500754
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AA seq
343 aa
AA seq
DB search
MNIDIAALRAIEADKGISIETVISTIQTALLTAYRHTEGHQQHARIDVDTKSGIVRVMAH
DVDADGNMVGEEWDDTPEGFGRIAATTARQVILQRLRDAEHERSFGEYATHEGEIVGGVI
QRDTRANSRGMVVVRIGSEASGAEGLIPPAEQVPGENYEHGERLKCYVVGVARGQRGPQI
TLSRTHPNLVRKLFALEVPEIADGSVEIIAVAREAGHRSKIAVQSRVQGLNAKGACIGPM
GQRVRNVMSELAGEKIDIIDFDEDPARFVGNALSPSKVVSVTVVDPEARAARVVVPDFQL
SLAIGKEGQNARLAARLTGWRIDIRSDAAPAPESAGGPAATSR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatcgacatcgcggcgttgcgcgccatcgaggccgacaagggcatctcgatcgag
accgtcatctcgaccattcagaccgcgttgctcaccgcctatcggcacaccgaggggcat
cagcagcacgcacggatcgacgtcgacaccaagagcggcatcgtgcgggtgatggcgcac
gacgtcgacgccgacggcaacatggtcggcgaggaatgggacgacaccccggaaggcttc
ggccggatcgccgcgaccaccgcccgccaggtcatcctccagcggctgcgcgacgccgag
cacgagcggagcttcggtgagtacgccactcacgagggtgagatcgtcggcggcgtgatc
cagcgcgacacccgcgcgaactcgcgcggcatggtcgtggtgcggatcggcagcgaggcc
agcggcgccgagggtctgatcccgcccgccgagcaggtgcccggggagaactacgagcac
ggcgagcggctcaagtgctacgtcgtcggtgtggcccgtggacagcgcggaccgcagatc
acgctgtcgcgcacccacccgaacctcgtccgcaagctgttcgcgctcgaggttccggaa
atcgcggacggttcggtcgagatcatcgccgtcgcccgggaggccgggcaccggtcgaag
atcgccgtccagtcgcgggtgcagggactgaacgccaagggtgcgtgtatcgggccgatg
ggccagcgggtgcgcaacgtgatgagtgaactcgccggcgagaagatcgacatcatcgac
ttcgacgaggacccggcccggttcgtcggcaacgcgctgtcgccgtcgaaagtggtctcc
gtcactgtcgtggatcccgaggcacgggccgcgcgtgtcgtcgtccccgacttccagctg
tcgctcgccatcggcaaggaagggcaaaatgcccgtcttgctgcgcgcttgaccgggtgg
cggatcgacatccgcagtgacgccgcacccgcccccgagtcggcaggcggacccgccgcg
accagtcgttga
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