Rhodococcus opacus PD630: Pd630_LPD03317
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Entry
Pd630_LPD03317 CDS
T03071
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roa03016
]
Pd630_LPD03317
Enzymes [BR:
roa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pd630_LPD03317
Transfer RNA biogenesis [BR:
roa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pd630_LPD03317
Prokaryotic type
Pd630_LPD03317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHK30536
LinkDB
All DBs
Position
3509248..3510165
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AA seq
305 aa
AA seq
DB search
MSAREKPSSGLVGAGLLIVDKDAGVTSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYTATIRLGQATTTDDAEGEVVASADASGVTDKEIAAQVRTLTG
DIQQIPSSVSAIKVDGRRAHALIRAGEEFELAARSVTVSRFEVVARRTEGTFVDLDVEVE
CSSGTYVRALARDLGIALIGVGGHLTSLRRTRVGPFTLEHARTLEQLAEEPGVSLDIDAA
AQTAFPHRQIDADEAESISQGRWLEPIGIKGVYAAIDPSGHTIALLQERGRRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcacgtgaaaaaccctcttccggtctcgtcggcgccggactgctcatcgtcgac
aaggacgcgggcgtcaccagccacgacgtggtggcccggtgccgcaagctgctcggcacc
cggaaggtcgggcacgcgggcactctcgacccgatggccaccggggtgctggtgctcggt
gtggagcgggcgacgaagctgctggggctcctcgcgctgaccaccaaggcgtacacggcc
acgatccggctgggtcaggccaccaccaccgacgacgccgagggtgaggtcgtcgcgtcg
gccgatgcgtccggcgtgacggacaaggagatcgccgcgcaggtgcgtaccctcaccgga
gacatccagcagatcccgtcgagcgtcagcgccatcaaggtcgacggccggcgagcgcac
gccctgatccgtgcgggcgaggagttcgaactcgctgcccgctcggtcacggtgtctcgg
ttcgaggttgtcgcgaggcgaaccgagggcacgttcgtcgacctcgacgtcgaggtggag
tgttcctccggcacctatgtccgggcgctcgcgcgtgatctggggatcgcgctgatcggc
gtcggcgggcatctcacctcgctgcgacggacccgggtgggaccgttcacgctcgagcac
gcgcgcacgctggagcagctggccgaggagccgggggtcagtctcgacatcgacgccgcc
gcgcagaccgcgttcccgcaccggcagatcgacgcggacgaggccgaatcgatcagtcag
gggcggtggctcgagccgatcggaatcaagggtgtctacgccgccatcgatccgagcggg
cacacgatcgcgctgctccaggaacgtggacggcgggccagctcggtgatggtggtccgc
cccgcgaccctgaggtag
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