KEGG   Rhodococcus opacus PD630: Pd630_LPD03397
Entry
Pd630_LPD03397    CDS       T03071                                 
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa00300  Lysine biosynthesis
roa00470  D-Amino acid metabolism
roa01100  Metabolic pathways
roa01110  Biosynthesis of secondary metabolites
roa01120  Microbial metabolism in diverse environments
roa01230  Biosynthesis of amino acids
Module
roa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:roa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Pd630_LPD03397
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Pd630_LPD03397
Enzymes [BR:roa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Pd630_LPD03397
SSDB
Motif
Pfam: DAP_epimerase Gp138_C
Other DBs
NCBI-ProteinID: AHK30616
LinkDB
Position
3592818..3593687
AA seq 289 aa
MDFSKGHGTENDFVVLPDPDVRIDLSAPRVSALCDRRRGLGADGILRVAKAGALAAAGVL
AELPDGTSEDDWFMDYRNADGSIAEMCGNGVRVFAHYLRAAGLETRDEFVVGSRAGGKPV
IVHSADGAFGEVTVDMGVVRDLGTSAATIDGKVFNGIGIDVGNPHLACVDAHLTAASLSA
LDLTAAPGFDPGFFPHGVNVEILTRIDSGAVDMRVHERGVGETRSCGTGTVAAATAALRF
DGADSGEVNVRIPGGQVTVAVSDGRATLRGPSVLVASGNLDDGWWNGLA
NT seq 870 nt   +upstreamnt  +downstreamnt
atggatttcagcaaggggcacggcaccgagaacgacttcgtggtcctcccggatcccgac
gtccgcatcgacctgtcggccccgcgggtgtcggcgctgtgcgatcgcaggcgcgggctc
ggcgccgacggaatcctgcgcgtcgcgaaggccggtgcgctggctgccgccggtgtgctc
gccgaactccccgacggcacgtccgaggacgactggttcatggactaccgcaacgccgac
ggctcgatcgcggagatgtgcggcaatggcgtccgcgtcttcgcccactacctccgcgcg
gcggggctcgagacgcgcgacgagttcgtggtcggcagccgggccggtggcaagccggtg
atcgtgcactcggcagacggcgccttcggcgaggtcaccgtcgacatgggtgtggtgcgg
gatctgggaaccagtgccgcgaccatcgacggcaaggtgttcaacgggatcggcatcgac
gtcggcaacccgcacctggcgtgcgtcgatgcgcacctcacggcggcgtcgctgtcggcc
ctcgacctgacggccgcacccgggttcgatcccggcttcttcccgcacggcgtgaacgtg
gagatcctcacccgcatcgattccggtgccgtggacatgcgggtacacgagcgcggggtc
ggcgaaacacggtcgtgcggcaccggcacggtggccgcggctaccgctgcgctgcgcttc
gacggggccgactccggtgaggtgaatgtccgtattcccggtggtcaggtcaccgtggcg
gtgtccgacggccgggcgacgttgcgcggaccgtccgtcctggtggcgtccgggaacctc
gacgacggctggtggaacggcctcgcctga

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