Rhodococcus opacus PD630: Pd630_LPD03397
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Entry
Pd630_LPD03397 CDS
T03071
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00300
Lysine biosynthesis
roa00470
D-Amino acid metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01230
Biosynthesis of amino acids
Module
roa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pd630_LPD03397
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pd630_LPD03397
Enzymes [BR:
roa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pd630_LPD03397
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Gp138_C
Motif
Other DBs
NCBI-ProteinID:
AHK30616
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Position
3592818..3593687
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AA seq
289 aa
AA seq
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MDFSKGHGTENDFVVLPDPDVRIDLSAPRVSALCDRRRGLGADGILRVAKAGALAAAGVL
AELPDGTSEDDWFMDYRNADGSIAEMCGNGVRVFAHYLRAAGLETRDEFVVGSRAGGKPV
IVHSADGAFGEVTVDMGVVRDLGTSAATIDGKVFNGIGIDVGNPHLACVDAHLTAASLSA
LDLTAAPGFDPGFFPHGVNVEILTRIDSGAVDMRVHERGVGETRSCGTGTVAAATAALRF
DGADSGEVNVRIPGGQVTVAVSDGRATLRGPSVLVASGNLDDGWWNGLA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagcaaggggcacggcaccgagaacgacttcgtggtcctcccggatcccgac
gtccgcatcgacctgtcggccccgcgggtgtcggcgctgtgcgatcgcaggcgcgggctc
ggcgccgacggaatcctgcgcgtcgcgaaggccggtgcgctggctgccgccggtgtgctc
gccgaactccccgacggcacgtccgaggacgactggttcatggactaccgcaacgccgac
ggctcgatcgcggagatgtgcggcaatggcgtccgcgtcttcgcccactacctccgcgcg
gcggggctcgagacgcgcgacgagttcgtggtcggcagccgggccggtggcaagccggtg
atcgtgcactcggcagacggcgccttcggcgaggtcaccgtcgacatgggtgtggtgcgg
gatctgggaaccagtgccgcgaccatcgacggcaaggtgttcaacgggatcggcatcgac
gtcggcaacccgcacctggcgtgcgtcgatgcgcacctcacggcggcgtcgctgtcggcc
ctcgacctgacggccgcacccgggttcgatcccggcttcttcccgcacggcgtgaacgtg
gagatcctcacccgcatcgattccggtgccgtggacatgcgggtacacgagcgcggggtc
ggcgaaacacggtcgtgcggcaccggcacggtggccgcggctaccgctgcgctgcgcttc
gacggggccgactccggtgaggtgaatgtccgtattcccggtggtcaggtcaccgtggcg
gtgtccgacggccgggcgacgttgcgcggaccgtccgtcctggtggcgtccgggaacctc
gacgacggctggtggaacggcctcgcctga
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