Rhodococcus opacus PD630: Pd630_LPD03471
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Entry
Pd630_LPD03471 CDS
T03071
Name
(GenBank) putative HTH-type transcriptional regulator yidP
KO
K03710
GntR family transcriptional regulator
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roa03000
]
Pd630_LPD03471
Transcription factors [BR:
roa03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Pd630_LPD03471
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_Crp_2
HTH_20
MarR_2
LexA_DNA_bind
HTH_5
FaeA
HTH_PafC
HTH_DeoR
HTH_IclR
HTH_36
Fe_dep_repress
PolC_DP2_N
PaaX
HTH_24
TFIIE_alpha
HTH_41
Motif
Other DBs
NCBI-ProteinID:
AHK30690
LinkDB
All DBs
Position
3669680..3670456
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AA seq
258 aa
AA seq
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MVNPTPLQTASRSSRADHARRFADLLRQQIHADSFAERGLPSESELAEEFGVSRNAVRDG
LALLKQEGLIDRAPRVGTHVAQRKYDHGLDALLGLKETLKGHGDVRNDVRAALEISPPPA
VARRLQLEPGEPAVYIERVRYLGDLPLSLDLTYLVPDIGAEILGHDLETNDVFALIEEVC
GQPLGSADLAIESVNADAHSAANLQTPEGAALLLLERLTRLVDGRPVDLEYIRMRGDRIT
MRSSLVRRPDITNWELTS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaatccgactcccctccagacggcgtcgcgcagttcccgcgcggaccatgcgcgc
agattcgccgacctgctccgtcagcagatccacgcggactccttcgccgagcgcggattg
ccgtcggaatcggagttggccgaagagttcggcgtgtcgcgcaatgcggtacgcgacgga
ctggcgctgctgaagcaggaggggctcatcgaccgggccccgcgcgtgggaacgcacgtg
gcgcagcgcaagtacgaccacggtctcgacgccctgctcgggctgaaggagacgctcaag
gggcacggcgacgtccgcaacgacgtccgcgccgccctggagatcagcccgccgcccgcc
gtcgcccgccgcctgcagctggagccgggcgaacccgccgtctacatcgagcgggtgcgc
tacctcggcgacctgccgctcagcctggacctcacctacctcgttcccgacatcggagcc
gagatcctcggccacgacctcgaaaccaacgacgtgttcgcgctgatcgaggaggtgtgc
ggccagcccctcggctccgccgatctggcgatcgaatcggtgaacgccgacgcgcattcc
gccgcgaacctccagacgcccgagggtgcggcgctcctgttgctcgaacgcctcacccgg
ctcgtcgacggacgtcccgtcgacctcgaatacatccgcatgcgcggtgaccgaatcacc
atgcgcagcagcctcgtccgccgacccgacatcacgaactgggagctcacctcatga
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