Rhodococcus opacus PD630: Pd630_LPD03921
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Entry
Pd630_LPD03921 CDS
T03071
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roa03019
]
Pd630_LPD03921
Messenger RNA biogenesis [BR:
roa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pd630_LPD03921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
SKI
Motif
Other DBs
NCBI-ProteinID:
AHK31134
LinkDB
All DBs
Position
4113842..4114756
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AA seq
304 aa
AA seq
DB search
MNEQHAQSDRPPTVRPMDFLLVTGLSGAGLQTAAKVLEDLGWYVADNLPPELISRMVDLS
LESDSRLERLAVVIDVRSRLFTGDLGWVLTELESKPVHTRVLYLDASDEVLVRRFEQVRR
SHPLSGGGAEGTLSEGIAAERDQLAKVKAAADLVIDTSSLAAHQLRQKIEDAFGDAENRT
MQVTVQSFGFKYGLPMDADLVCDVRFLPNPHWIPELRPHTGQSADVRDYVLSQDGAEDYL
ATYHHLLDLTIAGYRREGKRYMTIAVGCTGGKHRSVAMSEALASRLGKDSGLNVRVVHRD
LGRE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagcagcacgcgcagagcgaccgtccacccacggtccggccgatggacttcctt
ctcgtcaccgggctctccggggcgggtctgcagacggcggcgaaggtcctcgaggacctc
gggtggtacgtcgcggacaaccttcccccggaactgatttcccgaatggtggatctgagc
ctggaatccgattcgcggctcgagcggctcgccgtcgtcatcgacgtgcgcagccggttg
ttcaccggcgacctcggctgggtcctcaccgaactggagagcaaacccgtgcacacgcgg
gtgctgtacctcgacgcgtcggacgaggtcctggtgcgccgtttcgaacaggtgcgccgc
agtcacccgctgtcggggggaggcgccgagggcaccctgtcggagggcatcgccgccgag
cgcgatcagctcgcgaaggtgaaggccgccgcggatctggtgatcgacacgtcgtccctc
gccgcgcaccagttgcggcagaagatcgaggacgcgttcggcgacgccgagaaccggacc
atgcaagtaacagtccagtcgttcggtttcaagtacggtcttccgatggacgccgatctc
gtctgcgacgtccgcttcctgcccaacccgcactggattcccgagttgcgtccgcacacg
gggcagagtgcggacgtgcgggactacgtgttgtcgcaggacggtgccgaggactatctc
gccacgtatcaccacctgctggatctgacgatcgcgggatatcgtcgggaggggaagcgc
tacatgaccatcgcggtggggtgcaccggagggaaacatcggagtgtcgcgatgtcggag
gccttggcgagccgcctcggaaaggactccgggctgaacgtgcgtgtcgtccatcgtgat
ctggggcgcgaatga
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