Rhodococcus opacus PD630: Pd630_LPD04254
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Entry
Pd630_LPD04254 CDS
T03071
Name
(GenBank) Penicillin-binding protein 2
Organism
roa
Rhodococcus opacus PD630
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
Transpeptidase
PBP_dimer
DUF6571
Motif
Other DBs
NCBI-ProteinID:
AHK31467
LinkDB
All DBs
Position
complement(4473721..4476576)
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AA seq
951 aa
AA seq
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MHDDKHDDKHDDKHESDPWIVGAAIVLVVLGLLNLLSTGKTADAVRHTLFAVAGLGIMYV
VSRLRMSDLRAFGWAVFTVATVLLAVVPLAGVATKGAQRWLDFGVFTVQPSELAKLALVL
VPASMLAGGFTPARFVATLAIGGVPIALVALQPDLSTAVVLVATLGFMLILARVPLLPLV
PLFVLGLASLPLAVLFLRPYQLERVHVFLSSNADPAGAGWAELQANIAIGSGGLWGLARD
PMYAVRAEYLPESEHDLAFASLVYGWGLIAGLAVVVATSVIVWRAALSARTARTREAALV
AAGIGALFGIHALVSIGQSLSLLPHTGMPIPLFSYGGTAAIVGFVAIGLVLAVRRDGVAR
PLWTPDPRRRRRPRGMSAGTLTMTAAFVAMSVFAWQLQHDRGAEFRAMSDQQMMRCIRLP
AERGLILDRNGIPLAVNVAEYAVAVVARMFEENDDDTRNRLAALLATSPDELADLIEAGG
EGESQVAVGRVAPDQARRIVDARLPGVLVVPSGRRQYPYGAVLASVLGHVGVADADDMER
WPHLALGSRVGKAGLEKQYDALLRGSDGKQCMYVDPSGHPVAAGERVDPVRGHDLRLHLD
IGVQNLATDALVEAMRTSKGDLGAAVVMDARNGAVLALASVPGADNNVYGPPADLVALAA
QSQTPGPSPLLNNATQTAVPPGSTFKIVVAAANTRYPVLSPDTVIDTGAAYTYGGHTFRN
WQPMGPHNLLQAIQWSDNVYFYKLGELLGPEKMADVAGQLGVGRRSGIDLPGEAEGFLGT
PENVGSIGATWYPGSTLLMGIGQGTVSATPIQVARWTSGIATGAMVTPQLAAAYGSDSVP
IPTAAPQRLPFADLLGPVRAGMRASASAGTAGQLADLPVPAGAKTGTAEDPSAPGEGLNA
WFSAVAPFDAPQIQVSVLIRGGGFGSATAGPVVKKLLDHYFPRPPAPAPIR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgacaagcacgacgacaagcacgacgacaagcacgaatccgacccgtggatc
gtcggtgcggcgatcgttctcgtcgtgctcggccttctgaatttgctctcgacagggaag
acagcagacgctgttcgccacacgctcttcgccgttgccggtctcggcatcatgtatgtg
gtgtcccgcctgcggatgagtgatctccgcgccttcggctgggcagtgttcaccgtggcc
accgtgttgctggcggtcgtgccgctcgcgggggtcgcgaccaagggtgctcaacgctgg
ctggacttcggcgtgttcaccgtccagccgtccgaactggcgaagctcgccctggttctc
gtgcctgcgagcatgctcgccggtgggttcacgccggcacgattcgtcgcgaccttggcg
atcgggggtgtacccatcgcactcgtcgcactccaacccgacctgtcgactgccgtcgtc
cttgtcgcgacgttgggattcatgctcatcctcgcccgcgtcccgctgctgcctctggtt
ccgctgttcgtgctgggtctcgcgtcgcttccgctggccgtgctcttccttcgcccctac
cagctcgaacgggtccacgtgtttctgtcgagcaacgccgaccccgccggcgcgggatgg
gccgagttgcaagcgaacatcgcgatcggcagcggtggcctgtgggggctggcgcgcgac
ccgatgtacgcggtgcgggccgagtatcttcccgaatcggagcacgatctcgcgttcgcc
agcctggtgtacgggtggggtttgatcgccggcttggctgtcgtggtggcaacttcggtc
atcgtgtggcgggctgcactctccgcgcgcacggcgcgcactcgcgaggccgcactcgtc
gcggccggaatcggcgcgttgttcggcatccacgcgctggtgtcgatcggtcagagtctg
tcgcttctgccccataccggcatgccgattcccctcttcagctacgggggcaccgccgcc
atcgtcggtttcgtcgccatcggactggtgctcgcggtgcgccgagacggcgtcgcgcga
ccgctgtggaccccggatccccgacggcgacgccgcccgcgcggaatgtcggcgggcacc
ctgacgatgaccgcggcattcgtcgcgatgtcggtattcgcgtggcagttgcaacacgac
cggggtgcggagttccgggcgatgagcgaccagcagatgatgcggtgcatccgcctgccc
gcagagcgcggactgatcctcgaccgcaacggtattccgctcgcggtcaatgtcgccgag
tacgccgtggcggtggtcgctcggatgttcgaggagaacgacgacgacacccgcaaccgg
ttggccgctctgctagccacgtctcccgacgagttggcggacctgatcgaggccggtggc
gagggggaatctcaggtggcggtaggcagagtcgcgcccgaccaggctcgccgcatcgtg
gatgcgcgacttcccggtgtgctcgtggtgccgtccggtcgcaggcagtacccgtacggt
gccgtgctcgcctccgtcctcggacacgtcggggtcgccgacgccgacgacatggaacgc
tggccgcatctcgcgctcgggtcacgcgtcggcaaggcgggactcgagaagcagtacgac
gctctgctccgcggcagcgacggcaaacagtgcatgtacgtcgatccgtccgggcatccg
gtggcggccggcgaacgcgtggacccggtacggggccacgatctgcgcctgcacctcgac
atcggggtccagaacctggccaccgacgcgctcgtggaggcgatgcgcaccagcaagggc
gacctcggtgccgccgtcgtgatggacgcgcggaacggagccgtgctggccctcgccagt
gttcccggggccgacaacaacgtctacggacctccggccgacctcgtcgccctcgcggcg
cagagtcagaccccggggccgagcccgttgctcaacaacgccacccagaccgcggtcccg
cccggttccaccttcaagatcgtcgtcgcggcggcgaatacccgatacccggtgctgtcg
ccggacacggtgatcgacaccggcgccgcctacacctacggcggtcacacgttccggaac
tggcaaccgatgggcccgcacaatctgctccaggcgatccagtggtccgacaacgtctac
ttctacaagctcggtgaactcctgggcccggagaagatggcggacgtcgcggggcaactc
ggcgtcggccggcggtccggaatcgacctgcccggcgaggccgaggggttcctcggcacc
ccggagaacgtcggaagtatcggggccacctggtatcccgggtcgaccctgttgatgggc
atcggacagggcaccgtcagcgcgaccccgatacaggtggcgcgctggacgtcggggatc
gccacaggcgcgatggtgacgccccagctcgccgcggcgtacgggtcggactcggtgccc
ataccgacggcggcgccgcagcgtctacccttcgccgacctgctcggtcccgtccgggca
ggaatgcgggcgtccgcgtcggcggggaccgccgggcaactcgcggacctcccggtcccg
gccggcgcgaagaccggcacggcggaggacccgtcggcgcccggagaaggactgaacgcc
tggttctccgcggtcgcgcctttcgacgcaccccagatccaggtgtcggtgctgatccgc
ggtggtggcttcgggtcggcgacggcgggccccgtggtcaagaaactcctcgaccactac
tttccgcgaccacccgcgccggcgccgattcggtga
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