Rhodococcus opacus PD630: Pd630_LPD04561
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Entry
Pd630_LPD04561 CDS
T03071
Name
(GenBank) Acetoin dehydrogenase operon transcriptional activator AcoR
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roa03000
]
Pd630_LPD04561
Transcription factors [BR:
roa03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pd630_LPD04561
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_50
HTH_28
HTH_29
HTH_30
HTH_22
HTH_23
HTH_11
HTH_7
HTH_17
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
AHK31774
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Position
4776613..4778361
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AA seq
582 aa
AA seq
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MTSKDLQKARELFLADNDLDSSVRQPISYSWQRSKSLKVRPDQLDLPFVREPNLDCPLVA
AAEPVLRQLADGLVDEPVSVILTSADGVILTRITASRRLDRTLDAVQLIPGYSYSEEFAG
TNGIGTTLETRQPTLVTGAEHYADCLGQLACAGVPITHPMSGALVGALDLTGWVEDGGPL
LATLAKSATAQIEGRLLAQASADQTALLNAYLKACRRSPQTGVLALGDDVILVNRKLRVA
LDAQDQGALLEHAVDLSGTPATQRHIVALPSGQTARLSSVEDFGLGARRQMALFYVHLLE
IPTSGSPALESIRVLPGITGSSASWRRSCQQIARCAREQQWVTVSGETGSGRGSALKAVA
IEHIPIRTRIFTVGELAGDSAALSALEQELGQERFSVILRDIDLLGESQQRIVADLIQGR
EHAGWIGATIGGTDHNTDLDTLILPHFSHTVTMPALRHRIDDLHSLVPHLLRQLGRGADL
SLSPAAMRQLCKYSWPGNVTELRQVLHEVVQRQRSGVVEVEQLPPMCRALSRHTLTQIEA
LERDAIVRSLEENHGNKKAAATALGISRATIYRKIKEFGIDI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaaggatttacagaaggcgcgagagctgttcctcgccgacaacgacctcgac
agctccgttcgccagcccatctcgtactcgtggcagcgatcgaagtcgctcaaggtgcgc
ccggatcagctcgacctcccgttcgtacgagagccgaatctggactgccctctcgttgcg
gcagccgaacccgtcttgcggcagctcgcggacggactggtcgacgaaccagtcagcgtc
atcctgacctcggctgacggagtgatcttgaccaggatcaccgccagccgacgactcgat
cggacactcgacgcggtccaactgatacccggttacagctactcggaagaattcgccggc
acgaacggcatcggcaccactctcgaaacccgtcagcccaccctggtgacgggcgccgag
cattacgccgactgtctcgggcagctcgcatgcgccggtgtcccgatcacccatccgatg
tccggcgccctcgtcggtgcactcgatctcaccggctgggtagaggacgggggtccgctg
ttggccaccctcgccaaatccgccacggctcagatcgaaggtcggctcctggcacaggcc
agtgcggaccagaccgcgttactcaacgcctatctgaaggcctgtcggcggtcaccccag
acgggagtgttggcgctcggagacgatgtcattctcgtcaaccgaaaactacgcgtggca
ctggatgcccaggatcagggtgcgttgctcgaacacgccgtcgacctgagcggcactccg
gccacccaacgacacatcgtcgccctgcccagcgggcagacggcccggctttcatcggtc
gaggacttcgggctcggcgctcggaggcagatggccttgttctacgtgcatctactcgag
atccccacatcgggatcccctgcgctcgagagcatccgcgtcttgcccggaatcaccggg
agcagcgcgtcctggcgccgcagttgccagcaaatcgctcgctgcgcgcgcgaacaacag
tgggtcaccgtgtccggcgaaaccggaagcggccgcggatcggctctcaaagctgttgcc
atcgaacatattcccatccgcacacggatcttcacggtgggcgaactcgcgggcgacagc
gccgccctgtcggcactcgaacaggaactcgggcaagagcgattcagcgtcatcctgcgc
gacatcgatctcctcggcgagtcacagcagcggatcgtcgccgacctcattcaaggacgc
gagcacgccggatggatcggtgcgaccatcggcggaaccgatcacaacaccgacctcgac
acactgatccttccccacttcagccataccgtcaccatgcccgcgctgcgtcatcgcatc
gacgatctccacagcttggtaccgcatctactgaggcagctcggtcgcggcgcggacttg
tctctctcgcctgcggcgatgcgccaactctgcaagtacagctggcccggaaacgtcacc
gagctccggcaggttctgcacgaggtggtccagcgtcagcgctccggtgtcgtcgaggtc
gagcagcttcccccgatgtgccgagctctgagccgacacacactcacgcagatcgaagcc
ctcgaacgcgacgccatcgtgcgcagcctcgaagagaaccacggcaacaagaaggctgca
gcgacagctctcggcatctcacgggccaccatctaccggaagatcaaggaattcggcatc
gacatctga
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