Rhodococcus opacus PD630: Pd630_LPD04816
Help
Entry
Pd630_LPD04816 CDS
T03071
Name
(GenBank) RNA polymerase sigma factor sigW
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD04816
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pd630_LPD04816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_28
HrcA_DNA-bdg
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AHK32029
LinkDB
All DBs
Position
complement(5002879..5003370)
Genome browser
AA seq
163 aa
AA seq
DB search
MRAAYDDHGRELFALAYRSLGDRGRAEEAVQETFLRAWRGADRYDPRRSTLRTWLYAICR
NVVIDAIRARAARPELADAAPPELPAPERPLEQLLVGLEMEEALRRLSDQHRCVLVEIHL
RDRPASEVAAQLGIPVGTVRSRVYYALKALRLVLEEMGWHGDH
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggccgcctacgacgaccacggcagggaactgttcgccctcgcctaccgctccctc
ggagaccggggtcgcgcggaggaggcggtgcaggagacgttcctgcgtgcgtggcggggc
gcggaccggtacgacccgcggcgctctacgctccggacctggctgtatgcgatctgccgc
aacgtggtgatcgacgcgatccgggctcgtgccgcccgacccgagttggccgacgctgca
ccacccgagttgcccgcacccgagcgtcccctcgaacaactgctggtggggctcgagatg
gaggaggcgctgcggcggctgtccgatcagcaccgctgcgtcctggtcgagattcacctg
cgtgaccggcccgcctcagaggtggccgcacagctcggcattcccgtgggcaccgtccgc
agtcgtgtgtactacgcgctgaaggctctccgactcgtactcgaagaaatggggtggcat
ggtgaccactga
DBGET
integrated database retrieval system
