Rhodococcus opacus PD630: Pd630_LPD05029
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Entry
Pd630_LPD05029 CDS
T03071
Name
(GenBank) Putative 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pd630_LPD05029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD05029
Enzymes [BR:
roa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pd630_LPD05029
DNA repair and recombination proteins [BR:
roa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pd630_LPD05029
Prokaryotic type
Pd630_LPD05029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AHK32237
LinkDB
All DBs
Position
complement(5214364..5214981)
Genome browser
AA seq
205 aa
AA seq
DB search
MTIDRLDRAEPVDAARIVLGSMLIVGDVRIRIVEVEAYGGEKDGPWPDPASHSYRGKTPR
NEVMFGPAGHLYVYRSYGMHFCMNVSYGPVGSAGGVLLRAGEVLDGCATVQARRPRVTRP
ADWARGPGNLGSATGVTLAENGAALFEHDSPVRLEVAESDGWVSGPRVGVSTAADRPWRF
WIPESPAVSAYRRSPRAMPADEQMG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcgatcgacttgaccgggcggaacccgtcgatgccgcgcgaatcgttctcgga
tccatgctgatcgtcggagacgtccgcatccgcatcgtcgaagtggaggcgtacggcggg
gagaaggacggcccgtggcccgatccggcatcgcactcctaccgagggaagacgccgcgc
aacgaggtgatgttcggcccggccgggcacctgtacgtctaccgcagttacgggatgcac
ttctgcatgaacgtgtcgtacgggccggtcggaagcgcgggcggggtgcttctccgggca
ggcgaagtgctcgacggttgcgcgacggttcaggcgcgccggccccgcgtcacgcgacct
gcggattgggcgcgcggtcccggcaacctggggtccgcgaccggcgtaaccctcgccgag
aacggtgcggcgttgttcgagcacgattcgccggttcgactggaggtcgcggagtcggac
ggctgggtgagtggcccccgtgtcggtgtcagcacggccgccgaccggccgtggcgcttc
tggattccggagtcgccggcggtatccgcgtaccggagaagcccgcgtgcgatgcccgcc
gacgagcagatgggatga
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