Rhodococcus opacus PD630: Pd630_LPD05143
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Entry
Pd630_LPD05143 CDS
T03071
Name
(GenBank) putative FAD-dependent oxidoreductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00020
Citrate cycle (TCA cycle)
roa00190
Oxidative phosphorylation
roa00650
Butanoate metabolism
roa00720
Other carbon fixation pathways
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01200
Carbon metabolism
Module
roa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
roa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
roa_M00149
Succinate dehydrogenase, prokaryotes
roa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pd630_LPD05143
00650 Butanoate metabolism
Pd630_LPD05143
09102 Energy metabolism
00190 Oxidative phosphorylation
Pd630_LPD05143
00720 Other carbon fixation pathways
Pd630_LPD05143
Enzymes [BR:
roa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Pd630_LPD05143
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
FAD_oxidored
Thi4
GIDA
Pyr_redox_3
AlaDh_PNT_C
NAD_binding_7
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AHK32349
LinkDB
All DBs
Position
complement(5323350..5325284)
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AA seq
644 aa
AA seq
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MTEVERHQYDVVVIGAGGAGLRAVIEAREQGLSVAVVCKSLFGKAHTVMAEGGCAAAMGN
ANEKDTWQTHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDFAATGDYEARIKIFAECTISELTKD
GDRISGAFGYWRESGRFVLFEAPAVVMATGGIGKSFKVTSNSWEYTGDGHALALRAGANL
INMEFVQFHPTGMVWPPSVKGILVTEGVRGDGGVLKNSEGERFMFSYIPPVFKGQYAETE
EEADGWYKDSDNNRRTPDLLPRDEVARAINSEVKAGRQTPHGGVYLDIASRMPADEIVRR
LPSMYHQFKELADVDITKEQMEVGPTCHYVMGGIEVDPDSGSSSVAGLFAAGECSGGMHG
SNRLGGNSLSDLLVFGRRAGLGAAEYVKSLQERPVVSADAVDAAARMLLSPFDPAVGEGG
TTENPYTLHTELQQTMNDLVGIIRKEDEIVRALDKLTEIKGRIGGVEVEGHRQFNPGWHL
AVDLRNMVLVSECVAQAALLRTESRGGHTRDDHPSMEAEWRNTLLVCSVVGDMSAHPDSV
VPDVTVTREPQLPMRAELLELFDIDELAKYYTDAELAEHPGRKA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagtcgaacggcaccagtacgacgtcgtggtcatcggtgccggcggcgccgga
ctgcgagcggtcatcgaggcccgggaacagggcctgtccgtcgccgtcgtctgcaagtcg
ctgttcggcaaggcacacacggtcatggcggagggtggctgcgccgccgcgatgggaaac
gccaacgagaaggacacgtggcagacccacttccaggacacgatgcgcggcggcaagttc
ctcaacaactggcgaatggctgaactgcacgcccgcgaggctcccgacagggtgtgggaa
ctcgaaacgtacggcgccctgttcgaccggacccccgacggccggatcagccagcgcaac
ttcggcggtcacacgtatccgcggctcgcccacgtcggtgaccgcaccggactcgaactg
atccgcaccatgcagcagaagatcgtgtcgctgcagcaggaagatttcgccgccaccggc
gactacgaggcacggatcaagatcttcgccgagtgcaccatctccgagctgaccaaggac
ggcgaccggatctcgggtgcgttcggatactggcgcgagagtggacgtttcgtcctgttc
gaggcgccggccgtcgtgatggccaccggcgggatcggcaagtcgttcaaggtcacgtcg
aactcgtgggagtacaccggcgacggtcacgccctcgccctgcgcgcaggggccaacctc
atcaacatggagttcgtgcagttccaccccaccggcatggtgtggccacccagcgtcaag
ggcatcctcgtgacggaaggcgtccgcggcgacggcggggtcctgaagaactccgagggc
gagcggttcatgttctcgtacatcccaccggtcttcaaagggcagtacgcggagaccgag
gaagaggccgacggctggtacaaggattccgacaacaaccgccgcacaccggatctgctg
ccccgcgacgaggtggcccgcgccatcaactccgaggtcaaggccggacggcagaccccg
cacggcggcgtgtacctcgacatcgcctcgcggatgcccgccgacgagatcgtccggcgg
ctgccctcgatgtaccaccagttcaaggaactcgcggacgtcgacatcacgaaggagcag
atggaggtcgggcccacctgccattacgtgatggggggcatcgaagtcgaccccgacagc
gggtcctccagcgtcgcgggtctgttcgctgcgggggagtgctcgggcgggatgcacggc
tccaaccggctcggcggcaactcactgtccgacctcctcgtgttcgggcgtcgcgccgga
ctgggggcggcggagtacgtcaagtcgctgcaggaacggccggtcgtctccgcggacgcc
gtcgatgcggcggcgcggatgttgttgtcgccgttcgatcccgcggtcggggagggcggt
accaccgagaacccgtacacgctccacaccgaactgcagcagaccatgaacgacctcgtc
ggcatcatccggaaggaagacgagatcgttcgcgccctggacaaactcacggagatcaag
ggccgcatcgggggcgtggaggtcgaggggcaccggcagttcaacccgggatggcacctc
gccgtcgacctgcggaacatggtgctggtcagcgaatgcgtcgcgcaggcggcactgctg
cgcacggaaagtcgcggcgggcacacccgcgacgaccacccgagcatggaggccgagtgg
cgcaacaccctgctggtgtgcagcgtggtcggcgacatgtccgcgcatcccgattcggtg
gtgccggacgtcaccgttacccgcgagccccagctcccgatgcgcgcagagctgttggag
ctcttcgacatcgacgaactggccaagtactacaccgacgccgaactcgcggaacacccg
ggaaggaaggcctga
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