Rhodococcus opacus PD630: Pd630_LPD05202
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Entry
Pd630_LPD05202 CDS
T03071
Name
(GenBank) Bifunctional short chain isoprenyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00900
Terpenoid backbone biosynthesis
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Pd630_LPD05202
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
Pd630_LPD05202
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
roa01006
]
Pd630_LPD05202
Enzymes [BR:
roa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Pd630_LPD05202
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Pd630_LPD05202
2.5.1.29 geranylgeranyl diphosphate synthase
Pd630_LPD05202
Prenyltransferases [BR:
roa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Pd630_LPD05202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AHK32407
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All DBs
Position
5387932..5388924
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AA seq
330 aa
AA seq
DB search
MGGGYREAVTTLEDFVLRGGKRVRPAFAWTGWLGAGGDARGPEAGPVLRACSALELVQAC
ALVHDDIIDASTTRRGFPTVHVEFAEQHRAGAWSGDSAHFGEGVAILLGDLALAWADDMI
RESGITADASARISPVWSAMRTEVLGGQFLDISNEARADESIDAAMKVNRYKTAAYTIER
PLHLGAALAGADETLVSAYRRFGTDIGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAGKRT
VLFAMSLQRADAEDPAAAELLREGIGTDLSDSDVDTLRTTITSLGAVADVEKQIEDLVGN
ALSTLAASTATTEAKQQLIEMAVAATRRDY
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggtggttaccgcgaggccgtgaccaccctcgaagacttcgtcctgcgcggaggc
aagcgagtccgtccggccttcgcgtggaccgggtggctcggggcgggcggcgacgctcgc
ggccccgaggccggacccgtgctccgcgcctgctccgcgctggaactggttcaggcctgc
gcactggtccacgacgacatcatcgacgcgtccacgacgcgccgcgggttccccaccgtc
cacgtcgagttcgcggaacagcatcgtgcgggcgcgtggagcggtgattccgctcacttc
ggcgagggcgtcgcgatcctcctcggcgatctcgcgctggcctgggccgacgacatgatc
cgcgaatcgggcatcaccgcggacgcgtcggcccgcatctcccccgtctggtccgcgatg
cgcaccgaggtgctcggcgggcagttcctcgacatcagcaacgaggcccgggcggacgag
tcgatcgacgccgccatgaaggtgaatcggtacaagacggcggcgtacaccatcgagcgg
cccctgcacctcggtgcggcgctcgcaggcgccgacgagaccctggtctcggcgtatcgc
cgattcggcaccgacatcggtatcgccttccagctccgcgacgacctgctcggcgtgttc
ggcgatccggccgtgacgggcaagccctcgggcgacgacctgcgggcgggcaagcgcacc
gtcctgttcgcgatgtcgctgcagcgcgccgacgccgaagaccccgcggcggccgaactc
ctccgcgagggcatcggcaccgatctgtccgattcggacgtggacaccctccggaccacg
atcacctcgctcggcgcggtcgcggacgtggagaagcagatcgaggacctcgtcgggaac
gcgctgtcgacgctggcggcgagcaccgccaccaccgaggcgaagcagcagctcatcgag
atggccgtcgccgcgacgcgccgcgactactga
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