Rhodococcus opacus PD630: Pd630_LPD05363
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Entry
Pd630_LPD05363 CDS
T03071
Name
(GenBank) RNA polymerase sigma factor sigW
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD05363
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pd630_LPD05363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_23
GerE
Sigma70_ECF
Phage_antitermQ
HTH_24
HTH_38
PaaA_PaaC
HTH_20
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AHK32566
LinkDB
All DBs
Position
complement(5542217..5542723)
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AA seq
168 aa
AA seq
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MPDAQTELMHALYEEHAPAVWRYALRLTGDRARAEDIVQEVLLRAWKHPNVLDQSESSAR
AWLFTVARNLVFDEHRSARSQREIGMSSTPERAAPDSSDGALDAWMMGDALARLSPDHRA
VLVLGYYRGMSTNQIADELGIPEGTVKSRMHYGLRALRLALQEMGVTR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcccagacggagctgatgcacgccctgtacgaggagcatgcccccgcagtg
tggcggtatgccctgcggctgaccggcgaccgcgcccgcgccgaggacatcgtgcaggag
gtactgctgcgagcctggaagcatccgaacgtgctcgaccagtcggagtcgtcggctcgg
gcgtggttgttcacggtcgcccggaacctcgtgttcgacgagcaccgcagcgcccgctcc
caacgtgagatcgggatgagctccacacccgaacgcgctgcaccggacagctcggacggc
gctctcgacgcctggatgatgggtgatgcgctggcccggctcagtcccgaccatcgtgcg
gttctcgtgctcggctactaccggggaatgtcgaccaaccagatcgccgacgaactcgga
ataccggagggaacggtgaaatcccgcatgcattacggattgcgggcccttcgattggct
ctgcaggaaatgggggtgacccgatga
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