Rhodococcus opacus PD630: Pd630_LPD05619
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Entry
Pd630_LPD05619 CDS
T03071
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00300
Lysine biosynthesis
roa00470
D-Amino acid metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01230
Biosynthesis of amino acids
Module
roa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pd630_LPD05619
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pd630_LPD05619
Enzymes [BR:
roa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pd630_LPD05619
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHK32813
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All DBs
Position
complement(5799168..5800589)
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AA seq
473 aa
AA seq
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MNAHPAGPKHAEQLHAPGLPERPADAAAFAALSPEVWPRNAHRAADGVVSLAGIPVTELA
EKYGTPLFVVDEDDFRSRCRDMARAFGPTAKVHYASKAFLCGEIARWVADEGLSLDVASG
GELAVALHAGFPAERIAMHGNNKSVAELNAAVSARVGHIVLDSATEIDRLDKVAAEAGVV
QDVLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAAGNLRLVGLHSHIG
SQIFDVDGFELAAHRVIGLLRDVVAEFGVDKTAQISIIDLGGGMGISYVPTDDPPPVDQL
AAKLGDIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSNLTRRYVSV
DGGMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDVVIRDTWMPEDIDAGD
LLAVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLSLEVQE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgcaccccgcaggtcccaagcacgccgaacagctgcacgcacccggtctgccc
gaacgtcccgccgacgcggccgcattcgccgcactctctcccgaggtgtggccccgcaac
gcacaccgcgccgcggacggagtcgtcagtctcgcgggcatcccggttaccgaactggcc
gagaagtacggcacaccgttgttcgtggtcgacgaggacgacttccggtcccgctgccgc
gacatggcccgtgcgttcgggcccaccgccaaggtgcactacgcgtccaaggcgttcctg
tgcggcgagatcgcccgctgggtcgccgacgagggcctgtccctggacgtcgcgtcgggc
ggcgaactggcggtcgccctgcacgccggattcccggcggagcgaattgccatgcacggc
aacaacaaatcggtcgccgagctgaacgccgccgtgtcggcccgggtcgggcacatcgtg
ctcgactccgccacggagatcgaccgcctcgacaaggtggccgccgaagccggtgtggtg
caggacgttctgatccgcgtgacggtcggagtcgaggcacacacccacgagttcatctcc
acggcccacgaggaccagaagttcgggttctcgctcgcgggcggaaaggcgatcgacgcg
gtccgccgggtcttcgccgccggcaacctgcggctggtgggactccacagccacatcggc
tcgcagatcttcgacgtcgacggcttcgagttggccgcacaccgcgtgatcgggctcctg
cgggacgtcgtcgcggagttcggtgtggacaagaccgcccagatctcgatcatcgacctc
ggtggcggcatgggaatctcctacgtccccaccgacgacccgccgccggtcgaccagctc
gccgccaaactgggcgacatcgtgcgcaacgagtcggcgctcgccggcctgccggagccg
acgctggccgtcgaacccgggcgcgcgatcgccggacccggcacggtgacgctgtacgag
gtcggcaccatcaaggacgtcaccgtcggcagcaacctcacccgccggtacgtcagcgtc
gacggcggaatgagcgacaacatccgtaccgcgctgtaccaggcggagtacgaggccaag
ctggtctcgcgggtcagcgacgcggcaccggtggtgtcccgcgtcgtcggtaagcactgc
gagtccggcgacgtcgtgatccgcgacacctggatgcccgaggacatcgacgccggcgat
ttgctcgccgtcgcggccaccggtgcatactgctattcgatgtcgagcaggtacaacctg
ctcgcccgccctgccgtggtggcggtgcgcgacggacagtcgcgcgtgatcctccggagg
gaaactgtggaagacctgctgagcttggaggtacaggagtga
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