Rhodococcus opacus PD630: Pd630_LPD05645
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Entry
Pd630_LPD05645 CDS
T03071
Name
(GenBank) putative HTH-type transcriptional regulator yfiR
Organism
roa
Rhodococcus opacus PD630
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
EthR_C
TetR_C_24
DUF7623
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
AHK32838
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Position
complement(5826036..5826674)
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AA seq
212 aa
AA seq
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MSRPRIAPTPPVTARGVRTRDRLVAAARVVFEREGYLDARLVDISKEAGLSTGSFYTYFT
NKEEAFAAVVEVTQNDLLHPGMGRVADEGDVHAVVEASIRAYLHACRRNARLLALLEQVA
HVDPAFRELERSRDETFYRRNARAIADLQDRGLADASLDPMLTSKALSAMVGRMAYSYFV
GPPSERRSLTFEQLTAGLARMWTNALRVPDRV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcccgcgaattgcacccacaccaccggtcacggcccggggcgtccgcacccgc
gatcgtctcgtcgcggcggcccgggtggtgttcgagcgcgaggggtacctcgacgcccgt
ctcgtcgacatcagcaaggaggccggactctcgaccggatcgttctacacctacttcacc
aacaaggaagaggcgttcgcggcggtcgtcgaggtgacgcagaacgacctgctgcatccg
ggcatgggacgggtcgcggacgaaggcgacgtgcacgcggtcgtggaggcgagcatccgc
gcctacctgcacgcgtgccgccggaatgcgcgactgctggccctgctcgagcaggtcgcg
cacgtcgaccccgcattccgcgaactggaacgctcgcgggacgagacgttctaccggcgc
aacgcgcgggcgatcgccgatctgcaggaccgcggtctcgccgacgcctcgctcgacccg
atgctgacgtcgaaggcgttgtccgccatggtcggaaggatggcctacagctatttcgtc
ggaccgccgagcgagcggcgatcgctcacgttcgagcagttgaccgccggactcgcgcgg
atgtggacgaacgcgctgcgcgtccccgaccgcgtgtga
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