Rhodococcus opacus PD630: Pd630_LPD05897
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Entry
Pd630_LPD05897 CDS
T03071
Name
(GenBank) Periplasmic dipeptide transport protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pd630_LPD05897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD05897
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pd630_LPD05897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHK33088
LinkDB
All DBs
Position
complement(6104934..6106559)
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AA seq
541 aa
AA seq
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MARRFGRFRLAACIAATAVVVASCSQAHGSTDTGSQVEQGGDLVYLDAEVTASMQIQVSY
WQNSLVKDQLLDRLVYQDPETFEFVPWIAQSWTVDDPGTTYQFVIRDGVTYSDGTPLDVA
SVKRNIEWLAEGDKPKGIPRNAWFPKVTAVDTDAAARTVTVHLAEPNAPFLAALSMNTAG
LVADATIDASKEDQSVVTNLIGSGPFVAESEIPNKEIRLVKRRGYDWAPATAKHQGEAYL
DSVTVVPIEEDSIRVGALRSGEGDALRYTQPPDEALLQKEGFTVLGLRTPGLANVLDVRQ
TADFVDDVNVRKAVMYGIDRDQIVSTLYSDNWKPANSIITEGALGWKDRSDEVRFDPDEA
NRRLDTSGWTTRNADGIRQKEGRPLELSLYIDVYDHTSKPLYELVQRQLRAVGISLQLKQ
TDFANYPKATADPKLSLRRNGWPTADTFRLTQNYDSDQGDLFQLEGNDPYLDGLLRSQVT
ETDRNKRIALIEQIQDHVIDNAYTIPLLLDTQIFAVAPHIHDFRNAANSVPWFYDTWTER
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaggttcggacgcttccgcctcgcggcgtgcatcgcggcgacggcggtggtg
gtggcgtcctgcagtcaggcgcacggctccaccgacacgggatcgcaggtcgagcagggg
ggagacctggtgtacctcgacgccgaagtgacggcgtcgatgcagattcaggtgtcgtac
tggcagaacagcctggtcaaggatcagcttctcgacaggctggtgtaccaggatccggag
accttcgagttcgtgccgtggatcgcgcagagctggaccgtcgacgaccccggaaccacc
taccagttcgtcatccgggacggcgtcacgtacagcgacggcacgccgctcgacgtggcc
agcgtgaaacgcaacatcgagtggctcgccgagggcgacaagccgaaggggattccccgc
aacgcctggttccccaaggtgacggcggtcgacaccgatgcggccgcccgcacggtcacc
gtgcacctcgcggaaccgaacgccccgttcctggcggcgttgtcgatgaacacggccggc
ctcgtcgcggacgcaacgatcgacgcgagcaaggaagatcagtcggtggtgaccaatctg
atcggcagcgggcccttcgtcgcggagtcggagattccgaacaaggagatccgactcgtc
aagcgtcgtgggtacgactgggcgcccgccaccgcgaagcaccagggtgaggcgtacctc
gattcggtgacggtggtgcccatcgaggaggacagcatccgcgtgggtgcgttgcgctcc
ggggagggcgacgccctccggtacacccagccgccggacgaggcgctgctgcagaaggag
ggcttcaccgttctgggcctgcgcaccccgggcctggccaacgtcctggacgtccggcag
accgccgatttcgtcgacgacgtcaacgttcgcaaggcggtgatgtacgggatcgaccgg
gatcagatcgtgtccacgctgtactcggacaactggaagcccgcgaacagcatcatcacc
gagggcgcgctggggtggaaggaccgttccgacgaggtgcgattcgacccggacgaggcg
aatcgtcggctcgacacgtcgggttggaccacgcggaacgccgacgggatccggcagaag
gagggcaggccactcgaactcagcctgtacatcgacgtctacgaccacacgtcgaaaccg
ttgtacgaactcgtccagcgtcagctgcgtgcggtggggatctcgctgcagctgaaacag
accgacttcgcgaactatccgaaggcaactgcggatccgaaactgagcctgcgccggaac
gggtggcccacggccgacaccttccggctgacccagaactacgacagcgaccagggtgat
ctgttccagctcgaaggcaacgatccgtatctcgacggcctgctgcgttcgcaggtcacc
gagacggaccggaacaagcggatcgcgttgatcgaacaaatccaggatcacgtgatcgac
aacgcctacacgatccccctgctgctggatacccagatcttcgccgtcgccccgcacatc
cacgacttccgcaatgcggccaactccgtgccctggttctacgacacgtggacggagcgc
aagtga
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