Rhodococcus opacus PD630: Pd630_LPD05998
Help
Entry
Pd630_LPD05998 CDS
T03071
Name
(GenBank) Tellurium resistance protein TerD
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03030
DNA replication
roa03430
Mismatch repair
roa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pd630_LPD05998
03430 Mismatch repair
Pd630_LPD05998
03440 Homologous recombination
Pd630_LPD05998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roa03032
]
Pd630_LPD05998
03400 DNA repair and recombination proteins [BR:
roa03400
]
Pd630_LPD05998
Enzymes [BR:
roa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pd630_LPD05998
DNA replication proteins [BR:
roa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pd630_LPD05998
DNA repair and recombination proteins [BR:
roa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pd630_LPD05998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
PGM_PMM_I
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHK33189
LinkDB
All DBs
Position
complement(6218925..6220655)
Genome browser
AA seq
576 aa
AA seq
DB search
MDVETSGLRSSTHRVLSVAALALREDGSVERELVTLLNPGCDPGPVHIHNLTPQRLAGAP
RFEDVAKDLLELLDGRTLVAHNASFDYGFLDAEARRAGMTMPTRQRLCTLALSRRLEIDV
PNHKLSTLAAHWKVRQHRAHDAYDDALVLTEVFAHSASLAESLRLPLPVVGCADRRAVYP
DRVPRVESPWRNPGRLDPGAGLVQGMKLVISGSTDVPRLALAARLTAAGLDVMNSVSRQT
SVVVCNDPHSSSAKVRRAVADGIPVLTERQLGEMLLHVTPGEPKGAAAPSEVQRPRPATT
VPSTKPWHGRRVLIVGGSHADSVLMRSRIVQLGAKPSVNLSAGVTDVLVLDGGELDPRMD
RVSARQLPLLTAPDVNSALEPAAPPERGALREPIRPPSQWVAPLLARGEVIDLPPQTTSL
TVNASWRAHTEDDAFDVDVVALLLGEDGRVGCDEDFLFYNSPTSSDGTVELSCDGSSEQG
VRIELAALHSDYQCVSVSAAIGGDRAFGELGPISVTVDAPDRTIASFVLDAGTTERTMHF
AEIYRRAGQWRLRAVGQGYEYDLATLATEYGVTVDD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtcgagacctccggtcttcgttcgtccacgcacagagtgctcagcgtcgcggcg
ttggcgttgcgtgaagacggttcggtggagcgtgaattggtgactctgctcaacccgggc
tgcgacccggggccggtccatatccacaatctcacgccacagcgtctggcgggggcgccc
cgtttcgaagacgtcgcgaaagatctgctcgagcttctcgacggtcggacgctggtcgcg
cacaacgcgtcattcgattacggcttcctcgacgccgaggcacggcgggcggggatgacg
atgccgacacggcagaggctctgcaccctcgccctgtcgcgccgcctcgagatcgacgtc
cccaatcacaagttgtccactctggccgcgcactggaaggttcgtcagcaccgggctcac
gacgcttacgacgacgccctcgtgctgacggaggtcttcgcgcacagcgcctcgctggcc
gagtctctcagacttcctctgccggtcgtcggttgcgccgatcggcgggcggtgtacccc
gatcgggttccgcgcgtggagtctccgtggcggaatccgggtcggctggatccgggggcg
ggactggtccagggcatgaaactggtcatcagcggcagtacggatgttccccgtcttgcg
ctcgccgcacggttgaccgccgccggcctggacgtcatgaattcggtcagccgtcagacg
agtgtcgtcgtctgcaacgacccgcactcgtcgagtgcaaaggtgcgccgcgcggtggcc
gacgggattcctgtcctgaccgagcggcagctcggcgagatgttgctgcacgtgacaccg
ggtgagccgaagggggccgcggcaccgtccgaagttcagcggcctcgacctgcgacaact
gttccctccacgaagccttggcacggaagaagggtgctcatcgtcggtggctcgcatgcg
gactccgttctgatgcgctcccgcatcgtgcagctgggtgccaagccgtcggtcaatctc
tccgcaggagtcaccgatgtcctcgttctcgacggtggtgaactcgatccccgcatggac
cgagtgtcggcccgtcagttgcctctgctcaccgcccccgatgtgaactccgcactcgaa
ccggcggcaccacccgagcggggggcgctccgcgagccgatccgaccgccttctcagtgg
gttgcgccgttgctcgctcgcggtgaggtgatcgacctgccaccacagacgacatcgctg
acggtcaacgcgtcttggcgcgcccacaccgaggacgatgcgttcgacgtggatgtggtt
gcgcttcttctcggcgaagacggccgggtcggttgcgacgaggacttcctcttctacaac
tcgccgacgagttcggacggcaccgtggaattgtcctgcgacggcagcagcgagcaagga
gtgcggatcgaactggctgccctgcactccgactaccagtgcgtgtccgtatcggcggcg
atcggcggagatcgcgccttcggtgaactcggtccgatctcggtgaccgtcgacgctccg
gaccgcacgatcgcatcgttcgttctggacgccggcacgaccgaacggacgatgcatttc
gccgagatctaccgacgcgccgggcagtggcgtctccgcgcggtggggcaggggtacgaa
tacgatctcgccacgctcgccaccgagtacggggtgacggtcgacgattga
DBGET
integrated database retrieval system
