Rhodococcus opacus PD630: Pd630_LPD06328
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Entry
Pd630_LPD06328 CDS
T03071
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pd630_LPD06328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roa03019
]
Pd630_LPD06328
03110 Chaperones and folding catalysts [BR:
roa03110
]
Pd630_LPD06328
03029 Mitochondrial biogenesis [BR:
roa03029
]
Pd630_LPD06328
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
roa04147
]
Pd630_LPD06328
Enzymes [BR:
roa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pd630_LPD06328
Messenger RNA biogenesis [BR:
roa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pd630_LPD06328
Chaperones and folding catalysts [BR:
roa03110
]
Heat shock proteins
HSP60 / Chaperonin
Pd630_LPD06328
Mitochondrial biogenesis [BR:
roa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pd630_LPD06328
Exosome [BR:
roa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pd630_LPD06328
Exosomal proteins of other body fluids (saliva and urine)
Pd630_LPD06328
Exosomal proteins of breast cancer cells
Pd630_LPD06328
Exosomal proteins of colorectal cancer cells
Pd630_LPD06328
Exosomal proteins of bladder cancer cells
Pd630_LPD06328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHK33515
LinkDB
All DBs
Position
complement(6541196..6542821)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTVRLLETAKEIDTKEQIAATAGISAGDPSIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISAYFATDPERQEAVLEDAYILLVSSKISTVKDLLPLLEKVIQ
SGKPLVIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGLELLGQARKVVITKDETTIVEGAGDPEAIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APALDDLKLEGDEATGANIVRVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGHGLNASTN
EYGDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPVGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaagaggcccgtcgcggcctcgagcggggactcaac
gccctcgccgacgcagtcaaggtgacgttgggccccaagggtcgcaacgtcgtgctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtttccatcgccaaggagatcgag
ctggaggacccctacgagaagatcggtgccgagctggtcaaggaggtcgccaagaagacg
gacgacgtcgccggcgacggaaccaccaccgctaccgttctcgcccaggctctcgtccgt
gagggtctccgcaacgtcgctgccggcgccaacccgctgggtctgaagcgcggcatcgag
aaggccgtcgaggccgtcaccgtgcgtctgctcgagaccgccaaggagatcgacaccaag
gagcagatcgctgctaccgctggtatctccgcaggcgacccgtccatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacccggagcgtcaggaagccgtcctcgaggacgcgtacatcctgctc
gtgagctccaagatctccacggtcaaggacctgctgccgctgctggagaaggtcatccag
tccggcaagccgttggtcatcatcgccgaggacgtcgagggcgaagccctgtccaccctg
gtggtcaacaagatccgtggcaccttcaagtccgtggccgtcaaggctcccggcttcggt
gaccgtcgcaaggctcagctcgccgacatcgccatcctcaccggtggcgaggtcatcagc
gaagaggtcggcctctccctggagaccgccggactcgagctgctcggccaggcacgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgaaggcgcgggagaccccgaggccatc
gccggtcgcgtgtcgcagatccgtgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggtggcgttgcagtcatcaaggccggc
gctgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaagatgccgtgcgtaac
gccaaggctgccgtcgaagagggcatcgtcgccggtggtggcgtggctctgctgcagtcg
gctcccgcgctcgacgacctgaagctcgaaggtgacgaggccaccggtgcgaacatcgtt
cgcgtcgccctcgaagcaccgctgaagcagatcgccttcaacgcgggcctcgagcccggc
gtcgttgccgagaaggttcgcaacctgcctgcaggtcacggcctcaacgcctcgaccaac
gagtacggcgacctgctcgaagccggcatcaacgacccggtcaaggtcacccgctccgcg
ctgcagaacgcagcgtccatcgcggctctgttcctgaccaccgaggccgtcgtcgccgac
aagccggagaaggccggagcgcccgtgggcgacccgaccggcggcatgggcggtatggac
ttctaa
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