Rhodococcus opacus PD630: Pd630_LPD06343
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Entry
Pd630_LPD06343 CDS
T03071
Name
(GenBank) Cell division cycle protein 48
Organism
roa
Rhodococcus opacus PD630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_18
NACHT
Sigma54_activ_2
AAA_28
AAA_33
ATPase_2
nSTAND3
Adeno_IVa2
AAA_24
ABC_tran
Viral_helicase1
RNA_helicase
AAA_30
TsaE
IstB_IS21
AAA_29
NPHP3_N
Rad17
Mg_chelatase
CDC48_2
NB-ARC
NTPase_1
AAA_2
AAA_25
T2SSE
AFG1_ATPase
Parvo_NS1
ORC-CDC6-like
AAA_11
LTXXQ
Motif
Other DBs
NCBI-ProteinID:
AHK33530
LinkDB
All DBs
Position
6555767..6557950
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AA seq
727 aa
AA seq
DB search
MTSPELALTVRLNTSAADTRRGVVRLHPEALAALGLREWDAIALVGARRTAAVAGRAPSG
TPTGTALLDDVTLSNAGLTENSTVVVTPVTVYGGKTVTVSGSNLAVNSVSDVTLRHALLG
KVLTVGDTVSLLPRDLGPGTSTAPATQALSRTFGVAWTSELLTVTGVDPAGGPVSVQPNT
AVGWGEGVRATVSAAPSRLPAPPVRPAEEVPPVPVEDLVGAHTQAAKLTEWLGLALDEPE
LLRKLGASPHLGVLVTGPAGVGKATLARAVLASRRVVELDGPSAGALEADSRLQRVTAAV
DAIRSGGVLLITDIDALLPATPEPVSALIVEQLRRAVDTVGVAFVATSAHPESVDARLRG
QDLCDRELTLTLPDGSTRRALLELLLRKVPTDGIALDAIAARTPGFVVADLAALCREAAL
RAASRAARKPVDPALTQDDLLGALDVIRPLSRSGSEELAIGSVTLDDVGDMVETKQALTE
AVLWPLQHPDSFARLGVDPPRGVLLYGPPGCGKTYLVRALASSGHLSVHAVKGAELMDKW
VGASEKAVRELFQRARDSAPSLIFLDEVDALAPRRGQSSDSGVSDRVVASLLTELDGVEP
LRDVVVVGATNRPDLIDPALLRPGRLERLVFVPPPDGDARRAILRTSGKSVPLAADVDLD
ALADDLDGYSAADCSALLREAALAAMRRNIDAADVTAADVAEAREKVRPSLDPEQVAHLQ
SYALTRT
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccccggaactcgcgctcacagtccgactgaacacctcggccgccgacacccgg
cgcggcgtggtccggctgcatccggaagccctggccgcactcggcctccgcgaatgggac
gcgatcgccctcgtcggcgcgcgccgcaccgccgcggtggcgggtcgcgcgccgtccgga
acccccaccgggactgcgctcctcgacgatgtgaccctgtccaacgccgggctgaccgag
aacagcacggtcgtcgtgacgccggtgacggtgtacggcgggaagacggtcacggtcagc
ggctcgaatctggccgtcaactccgtctccgacgtcaccctgcgtcacgccctgctcggc
aaggtcctcacggtcggcgacacggtgtcgctgctcccccgcgatctgggccccggaacc
agcaccgcccccgcgacgcaggcactgtcccggacgttcggggtcgcctggacatccgag
ttgctcaccgtcaccggggtcgacccggccggtggtccggtgagcgtgcaacccaacacc
gcggtcgggtggggtgagggtgtgcgcgcaacggtgtccgcggctccgtcccggttgccc
gcgccgcccgtccggcccgccgaagaggttcccccggtcccggtcgaggacctggtcggt
gcccacacccaggcagccaaactcaccgagtggctcggactggcactcgacgaacccgaa
ctgctccgcaaactcggggcctcaccccatctgggcgtcctggtgaccgggcccgccggc
gtcgggaaggcgacgctcgcccgagcggtactcgcctcccgccgggtcgtcgaactcgac
gggccgagcgcaggcgcgctggaagccgactcacggttgcagcgggtcaccgcggcggtc
gacgcgatccgcagcggcggggtcctgctgatcaccgacatcgatgccctgctgcccgcc
acgccggagccggtgtcggcgctgatcgtcgaacagctccgccgcgcggtcgacaccgtc
ggggtcgcattcgtggcgacgtcggcgcacccggagtcggtcgacgcccggctgcgcggg
caggacctgtgcgaccgcgaactcaccctgaccctgcccgacggctccacccgccgggcg
ctgctggaactgcttctgcggaaggtccccaccgacggcatcgccctcgacgcgatcgcg
gcccgcacaccggggttcgtcgtcgccgacctcgccgcgctgtgccgggaagcagccctg
cgtgccgcctcacgcgcggccaggaaacccgtcgacccggcgctcacccaggacgacctg
ctcggcgcgctcgacgtgatccgcccgctgtcgcggtcgggcagcgaggaactcgcgatc
ggcagcgtcaccctcgacgacgtcggggacatggtggagaccaagcaggcgctgaccgag
gcggtgctgtggccgttgcagcacccggattcgttcgcccggctgggggtcgatcccccg
cgcggagtgctgctgtacggtccgcccggttgcggcaagacctatctcgttcgggcgctg
gcaagttcgggacatctgagcgtgcacgccgtcaagggcgccgaactgatggacaagtgg
gtgggcgcgtccgagaaggcggtccgcgaactgttccagcgggcgcgggattcggccccg
tcgctgatcttcctcgacgaggtggacgccctcgcaccgcgccgcggtcagagttccgac
tcgggggtgtccgatcgggtggtggcgtcactgctcaccgaactcgacggcgtcgaaccg
ctgcgcgacgtggtggtcgtcggcgctaccaaccggcccgacctcatcgacccggcgttg
ctgcgccccggccgcctggagcggctggtgttcgtgccgccaccggacggcgatgcccgc
cgagcgatcctgcggacgtccgggaagtcggtgccgctcgccgccgacgtcgacctcgac
gccctggccgacgacctcgacggctactcggccgccgactgctcggcgctgctgcgggaa
gccgcactggccgccatgcgccggaacatcgacgccgccgacgtcaccgcggccgacgtg
gccgaggcacgcgaaaaggtgcgcccctcactcgatcccgagcaagtggcgcacctccag
tcctatgcgctgacgcgcacgtga
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