Rhodococcus opacus PD630: Pd630_LPD06406
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Entry
Pd630_LPD06406 CDS
T03071
Name
(GenBank) Nickel-binding periplasmic protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pd630_LPD06406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD06406
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pd630_LPD06406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHK33593
LinkDB
All DBs
Position
complement(6640869..6642581)
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AA seq
570 aa
AA seq
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MRVSAAESSRQRARHFLEITEFSVPSVHLSSPHRGARIAAGIGAAAVLATALTACGGGSS
SSSADAGPAQPGGTLRYGLSQAPTCADPAQSGTNQTIYVARQVVDSLTDQDPATGELKPW
LAESWETDADASSFTFHLKEGVTFSDGTPFTADSVKKNLDAIVNTLSGAKAPLGASYLAG
YTGTTVIDPLTAQVDFAAPNAQFLQASSTPQLGILSDASVARSAEERCTGNISGTGPFTY
GDYQQDKSVTLAKRAGYNWGSDVFGHDGEAYLDTIEFSVVPESGVRTGSLSSGQLDAISD
ALPQDAPQIEGAGGQVLTTSNPGTPFGFQPNVTRGPLVDPVVRSALVPAINRQELVDTVL
GPNFKPATSTLASRTPGYVSLPDVTYDPEKAKSILDQAGWVPGADGIREKGGQKLSFPVL
FSSVFAGNQAILELVQQQLKEVGVDLQLNLVSTPEATARQNAKDFDATYYNSTRADGDIL
RTQFGLEGRNLNNRGPIPALDDVLAKQLATTDTTERSSLVADAQQQVLDNGLWIPTVELS
QAIGAGPNVQDLKFEASARLQFFDTWISGR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgagcgctgccgaatcgtctcggcagcgcgcacggcacttcctcgagatcacg
gagttctcggtgccatcagtgcatttgtcctcgccccaccgcggtgcccgcatcgcagca
ggtatcggcgccgccgccgtgctggccacggcgctcaccgcctgcggtggcggttccagc
agttcctccgcggatgcgggccccgcacagccgggcggcacactccgctacggcctctcc
caggcacccacgtgcgccgacccggcgcagtcgggcacgaaccagacgatctacgtggct
cgtcaggtggtggactcgctcaccgaccaggacccggcaacgggtgaactgaagccgtgg
ctcgccgagagctgggaaaccgacgccgacgcgtcctccttcacgttccacctgaaggag
ggtgtgacgttcagcgacggaacacctttcaccgcggattcggtgaagaagaatctcgac
gccatcgtgaacaccctctccggcgccaaggccccgctcggtgccagctacctcgccggt
tacaccggtaccaccgtgatcgacccgctgaccgcgcaggtcgacttcgccgcacccaac
gcgcagttcctgcaggcgtcgtcgaccccgcagctgggcatcctgtccgatgcgtccgtc
gcgaggtccgccgaagagcggtgcaccggcaacatctcgggcaccgggccgttcacgtac
ggcgactaccagcaggacaagtcggtgaccctcgccaagcgcgccggatacaactggggt
tcggacgtgttcggccacgacggcgaggcctatctcgacaccatcgagttcagtgtcgtg
cccgaatccggggtccgcacgggcagcctgtcctcaggacagctggacgcgatcagcgac
gcgttgccgcaggacgccccgcagatcgaaggcgcgggcgggcaggtgctcaccacgtcg
aaccccgggacgccgttcggtttccagcccaacgtgactcgcgggccgctcgtcgatccg
gtcgtgcgcagcgcgctggtcccggcgatcaaccggcaggaactggtcgacaccgtgctc
gggcccaacttcaagcccgccacgagcacgctggccagccgcacccccggctacgtgtcg
ctgccggacgtgacgtacgacccggagaaggcgaagtcgattctggatcaggcgggctgg
gttcccggtgccgacggcatccgggagaagggcggtcagaagctgagcttccccgttctg
ttcagctcggtgttcgccggtaaccaggccattctcgaactggtgcagcagcagctcaaa
gaggtgggagtggatctgcagctgaatctcgtgtccactcctgaggccaccgcccgccag
aatgccaaggacttcgacgccacctactacaacagcacccgcgccgacggtgacatcctc
cgcacccagttcggcctcgaaggccgcaacctgaacaaccgcggaccgattcccgcgctc
gacgacgtgctcgcgaagcagctcgccaccaccgacaccaccgagcggagttcgctcgtc
gccgacgcccagcagcaggtgctcgacaacggcctgtggattcccacggtggagttgtcg
caggcgatcggcgccggcccgaacgtgcaggacctgaagttcgaggcctcggcccggctc
cagttcttcgacacctggatcagcggacgctga
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