Rhodococcus opacus PD630: Pd630_LPD06599
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Entry
Pd630_LPD06599 CDS
T03071
Name
(GenBank) putative RNA polymerase sigma-D factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roa03021
]
Pd630_LPD06599
Transcription machinery [BR:
roa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pd630_LPD06599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_16
Zn_dep_PLPC
Motif
Other DBs
NCBI-ProteinID:
AHK33784
LinkDB
All DBs
Position
6841433..6842020
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AA seq
195 aa
AA seq
DB search
MIELDARAELERLAPHAAKGDEDAVEEVLRIAHPLVHRYCTSRLESVDHPHTTADDVTQD
VCLALMSALRTYENQGKSLLSFIFGIAAHKVSDARRRATRLSVPQTARAAAAHHVVDVED
GPEHHILRGELRGEMGQLVETLPVRHQQILFMRVIVGMSAEQTARVLDTTPGAVRVAQHR
ALSHLRARIGHGPAR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagttggacgccagagccgagttggaacgcctcgcgccgcacgcagcgaagggc
gacgaggacgccgtcgaagaggttctccgcatcgcgcaccccctcgtacaccgctactgc
acgagccggctcgagtcggtggatcacccgcacaccaccgccgacgatgtcacccaggac
gtgtgcctcgcgttgatgagcgccctgcggacgtacgagaaccaggggaaatcgttgctg
tcgttcatcttcggcatcgccgcgcacaaggtgtccgacgcgcggcgccgcgccacccgg
ttgtccgtgccgcagactgcgcgcgccgccgccgcacaccacgtggtggacgtcgaggac
ggccccgagcatcacatcctgcgcggtgaactgcgcggcgagatgggccagctcgtcgag
acccttccggtccggcaccagcagatcctcttcatgcgcgtcatcgtgggaatgtcggcc
gaacagacggcacgggtcctggacaccacaccgggcgccgtccgcgtcgcccagcaccgg
gcactgagccacctgcgggcgcggatcgggcacgggcccgcccgctga
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