Rhodococcus opacus PD630: Pd630_LPD06612
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Entry
Pd630_LPD06612 CDS
T03071
Name
(GenBank) D-ribose-binding periplasmic protein
KO
K10439
ribose transport system substrate-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pd630_LPD06612
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Pd630_LPD06612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD06612
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Pd630_LPD06612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AHK33797
LinkDB
All DBs
Position
complement(6857113..6858222)
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AA seq
369 aa
AA seq
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MTRTQRSIRAAARAVGVAAAVSVMASSAIACSTGSEEIERDGAAVDRGDMVMVSEVRSLT
NPYEAAWVQGSRAYAESLGIELKVIVYGGDSQNALSQLQSVLAAGKTVLLNINPNTSADT
PAIVRAVQNSGGCAVTQWSKPADLHPWDVGNGWASYVAYDGVQQGADTGKALVDSLGGTG
GVIALQGLLANEISQTRFQGFQQAMDGQSGVTLLDDQPADFDRNKAYTTTQTLLNKYGDQ
VNGIWAATDSMALGALQAVREAGRAGEIKIASAADATPEGLGAIANGELLSTYTTDPYFN
GAMGLAICYQAMSGALDVESLPRENREFFVDQSLITANNVDQFLAVPSDEEIVRSVQDPF
SRITGPVAR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacacggacgcaacgatcaatcagggcggcagcccgggccgtcggcgttgccgcggca
gtctccgtcatggcgagctccgccatcgcctgctcgacgggatcggaagagatcgagcgg
gacggggcggccgtcgaccggggcgacatggtgatggtctccgaggtgcggtcgctcacc
aacccgtatgaagccgcgtgggtgcagggcagccgcgcgtacgccgaatcgctggggatc
gaactgaaggtgatcgtctacggcggcgactcgcagaacgcgctgtcgcagttgcagtcg
gtgctcgccgcaggcaagaccgtgctgctcaacatcaacccgaacacgagcgccgacacc
cccgcgatcgtgcgcgccgtgcagaacagcggcgggtgcgcggtcacccagtggagcaag
ccggccgacctgcacccctgggacgtcgggaacggatgggcgtcgtacgtcgcctacgac
ggcgtccagcagggagccgacacggggaaggccctcgtcgattcgctcggcggcaccggc
ggcgtgatcgcgctgcagggtttgctcgccaacgagatcagccagacccggttccagggc
ttccagcaggcgatggacggacagtccggcgtcaccctgctcgacgaccagcccgccgac
ttcgaccgcaacaaggcctacaccaccacgcagaccctgctcaacaagtacggcgaccag
gtgaacggtatctgggccgcaacggattccatggcactgggcgccctgcaggcggtgcgt
gaggcgggccgcgcgggggagatcaagatcgccagcgccgcggacgccaccccggaaggc
ctgggcgccatcgcgaacggggaattgctctccacctacacgaccgacccctacttcaac
ggcgcgatgggactcgccatctgctaccaggccatgagcggcgcactcgacgtcgagtcg
ctgccccgggagaaccgcgagttcttcgtcgatcagtcgctgatcaccgcgaacaacgtc
gaccagttcctcgccgtgccgagtgacgaggagatcgtgcggtccgtgcaggatccgttc
tcccgcatcaccggcccggtagcccggtag
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