Rhodococcus opacus PD630: Pd630_LPD07788
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Entry
Pd630_LPD07788 CDS
T03071
Name
(GenBank) Penicillin-binding protein 1F
Organism
roa
Rhodococcus opacus PD630
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AHK34973
LinkDB
All DBs
Position
complement(8083875..8086034)
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AA seq
719 aa
AA seq
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MKKSRWKIVRRTAYACVAMGLVIPILLFMAAYVVQDVPRPGDLKTNQVATIYASDGTSVL
SKVVPPEGNRTEVTLDQIPKHTRDAVLAAEDRDFYSNPGFSIGGFARAARDNVLGKDSAG
GGSTITQQYVKKTMVGSERSLTRKMKELVISSKMAREWSKDDILAAYLNTIYFGRGAYGI
AAASKAYFNKPVDQLTVEESAVLASSIQLPSLLDPETNPEGAQARWNYVLDGMVSAGTLE
QSARSVMQYPPYVPIAQVDNGNQDSGPEGLIKNQVLRELGEAGISEQLLNTEGLEITTTI
DPVAQAAAVDSARSNMEGEPENLRTGVVSVDPKTGAVRAYYGGEDGGGYDFANAGLQTGS
SFKVFGLAAALDQGIPLSQMYDSSELTVNGITISNVEGEGCGTCTIAEALKRSLNTSFYR
QELELDGGPQAIADMAHKAGIPKEIPGVGPSLTEPDGNGPNNGIVLGQYQSRVLDMASSY
ATLAASGTYHAPHFVQKVVSADGTVLLDRGGDTGEDRIDKDVADNVTSAMEPIAGYSRNH
NLAGGRPSAAKTGTAQLGDTGQNKDAWMVGYTPSLSTAVWVGTTDGQALENSSGAMIYGS
GLPSDIWKDTMDGALEGTDVEKFPKPGAIGGQSGIPAYSAPAPTKTSAPPTSTFQLPTEL
VPPVVVTPSPVEILPGITIPIPGLAPRPTTAAPAVPAEPETTTPPNAGNGNGQQQVPAR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagtcgcggtggaagatcgttcgccggacggcgtacgcgtgcgtcgcgatgggt
ctggtcatcccgatcctgctgttcatggcggcgtacgtcgtccaggacgtcccgcggccc
ggcgacctcaagaccaaccaggtggccacgatctacgcgtccgacggaacgtcggtgctc
agcaaggtcgtgccgccggagggcaaccgcaccgaggtgacgctcgaccagatcccgaag
cacacccgtgacgcggtgctcgctgccgaggaccgggacttctactcgaaccccggcttc
tcgatcggtggtttcgcgcgtgccgcccgcgacaacgtcctgggcaaggacagtgccggc
ggtggctcgaccatcacgcagcagtacgtgaagaagacgatggtcggttccgagcgttcg
ctgacgcgaaagatgaaggaactcgtcatctcgtcgaagatggcccgggagtggtccaag
gacgacatcctcgccgcgtacctgaacaccatctacttcgggcgtggtgcgtacggcatc
gcggccgcgtcgaaggcgtatttcaacaagcccgtcgaccagttgacggtcgaggagagc
gcggtgctggcgtcgtcgatccagctgccgtcgctgctcgatccggagaccaacccggag
ggtgcgcaggcgcgctggaactacgtgctcgacggcatggtgtcggcggggacgctcgag
cagtccgcccggtccgtgatgcagtacccgccgtacgtgccgatcgcgcaggtcgacaac
ggcaaccaggactccggaccggagggcctgatcaagaaccaggttctgcgtgagctgggt
gaggcggggatcagcgaacagctgctcaacaccgagggcctcgagatcaccacgacgatc
gacccggtcgcccaggcggcggcggtggattcggcgcgctccaacatggagggtgaaccg
gagaacctgcgtaccggtgtcgtgtcggtcgacccgaagaccggcgcggtgcgcgcgtac
tacggcggcgaggacggcggtggttacgacttcgcgaacgccggactgcagaccggttcg
tcgttcaaggtgttcggtctcgccgcggccctggatcagggcatcccgctgtcgcagatg
tacgacagctcggagctgacggtcaacggcatcaccatcagcaacgtcgagggcgaggga
tgtggcacctgcaccatcgccgaggcgctgaagcggtcgctgaacaccagcttctaccgt
caggaactcgaactcgacggtggaccgcaggcgatcgccgacatggcccacaaggcgggc
atcccgaaggagatccccggcgtcgggccttcgctgaccgagccggacggcaatggtccc
aacaacggcatcgtgctcggccagtaccagtcgcgggttctcgacatggcgtcgtcgtac
gccacgctggccgcatcgggtacataccacgccccgcacttcgtgcagaaggtcgtgagc
gcggacggaacggtgctgctcgaccgcggcggcgacaccggtgaggaccgcatcgacaag
gacgtcgccgacaacgtgacgtcggcgatggaacccatcgccgggtactcgcgcaaccac
aacctggcaggcggacgcccgtcggcagcgaagacgggtaccgcgcagctcggtgacacc
ggacagaacaaggacgcctggatggtcgggtacaccccgtcgctgtccacggcggtctgg
gtgggcaccaccgacggtcaggcgctggagaacagcagcggcgccatgatctacggttcc
ggtctgccttccgacatctggaaggacacgatggacggcgccctcgagggcaccgacgtc
gagaagttcccgaagccgggtgcgatcggtggccagtcgggtatcccggcctattcggcg
ccggcaccgaccaagacgtcggcgccgccgacgagcacgttccagctgccgacggagctc
gtgccgccggtggtcgtgacaccgtcgccggtggagatcctgcccgggatcaccattccg
attccgggtctggcaccgaggccgaccaccgcggccccggccgttccggcggaaccggag
acgacgacgccgccgaacgccggtaacggaaacggccagcagcaggttccggcccgttaa
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