Rhodococcus opacus PD630: Pd630_LPD07799
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Entry
Pd630_LPD07799 CDS
T03071
Name
(GenBank) Penicillin-binding protein 1F
Organism
roa
Rhodococcus opacus PD630
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AHK34984
LinkDB
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Position
complement(8093973..8096195)
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AA seq
740 aa
AA seq
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MSSGNDATGNHASDPGGTPPVDDGSADTTTPPPDGKTKRNRWRTVRRVSLVVIALLLVIP
LVGFLVSYVRAEVPRPSDMKTNQVATVFAADGTTELTKVIPPEGNRTEIALDAIPQHVRD
AVLSAEDRNFYSNPGFSVTGFMRAARDNVLGKESAGGGSTITQQYVKNVLVGADRNVYRK
MRELVISTKMAREWSKDEILAAYLNTIYFGRGAYGIEAASRAYFDKPVGDLSVAEGAVLA
SVIQSPSYLDPEANLDQLQARWNYVLDGMVAMGVLSQQDRSAAEFPVTAPSNRPTDANSA
PGPDGLIRNQVLRELSDAGISEQTLNTEGLQITTTIDPRAQQSAIDAVHDNLEGEDPGLR
TAVVSIDPRTGGVRAYYGGEDGAGFDYAQAPLQTGSSFKVFGLAAALEQGIPLSARFSSA
PLTVGSVQIGNVEGESCGTCTIAEATKRSLNTSFYRLMMSLDNGPQAIADAAHKAGIPEF
IPGVQGKTLSENGGEPEGGIVLGQYLSRPIDMASAYATLAASGIYHQPYFVQRVVTADGV
VLLDRAPTPGERRLDAAVADNISQALMPIASYSRGHALAGGRPSAAKTGTAQLGDTGENK
DAWMVGYTPSLATAVWIGKADATAINNSWGGLIYGSGLPSDIWKDTMDGALEDTDWEDFP
WPDPIGGQAGVPTWTGQTSGDGTGPGTSGVVPPPGAPTPAPVEVPPPAAVPVPPVPPVPA
PVPAPTQIEILPGVIIPLPG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgagttctggcaacgacgcgacgggcaaccatgcctccgatccggggggcacaccgccc
gtagacgacggttcggctgacacgaccactccaccaccggacgggaagacgaagcgcaac
cggtggcgcacggtccgccgggtcagcctggtcgtgatcgcgttgctgctggtcatcccc
ctcgtcgggttcctggtcagttacgtccgcgccgaggtcccgcgcccgtcggacatgaag
accaatcaggtggccaccgtcttcgccgccgacggcaccaccgagctgaccaaggtgatc
cccccggagggcaaccgcaccgagatcgccctcgacgccattccccagcacgtccgcgac
gccgtcctgtcggcggaagaccgcaacttctactccaaccccggcttctccgtcaccggg
ttcatgcgtgccgcccgcgacaacgtcctcggcaaggaaagcgcgggcggtgggtcgacg
atcacgcagcagtacgtcaagaacgtgctggtcggcgcggaccgcaacgtgtaccgcaag
atgcgggaactcgtgatctccaccaagatggcccgcgagtggtccaaggacgaaattctc
gccgcctacctgaacaccatctacttcgggcgcggcgcgtacggcatcgaggcggcgtcg
cgcgcctacttcgacaagccggtcggcgacctgtcggtggccgagggcgcggtgctcgcc
tccgtgatccagagcccgtcctacctcgaccccgaggccaacctcgaccagctgcaggcg
cgctggaactacgtgctcgacggcatggtcgcgatgggtgtgctcagtcagcaggaccgc
agtgcggccgaattcccagtcaccgccccgtccaaccggcccaccgacgccaactccgcg
cccggccccgacggcctgatccgcaaccaggtgctgcgcgaattgtcggatgcgggaatc
tccgagcagaccctcaacaccgagggtctgcagatcaccaccacgatcgacccgagggcg
cagcagtccgcgatcgacgccgtccacgacaacctcgaaggggaggatccgggactgcgg
accgcggtcgtgtccatcgatccccgcaccggcggtgtgcgcgcctactacggcggcgag
gacggcgccggcttcgactacgcccaggcgccgctgcagaccgggtcgtcgttcaaggtg
ttcggcctggccgcggcgctggagcagggcatccccctctccgcccgcttcagcagtgca
ccgctgaccgtcggcagcgtccagatcggcaacgtcgagggcgagtcctgcggcacgtgc
accatcgccgaggcgacgaagcggtcgctgaacacgagcttctaccggttgatgatgtcg
ctggacaacggtccgcaggccatcgccgacgccgcccacaaggcggggatcccggagttc
attcccggggtgcagggtaagacgctcagcgagaacggcggcgaacccgagggcggcatc
gtcctcggccagtacctgtcgcggccgatcgacatggcgtccgcgtacgcgacgctcgcg
gcgtcgggcatctaccaccagccgtacttcgtgcagcgggtcgtgactgccgacggcgtc
gtgctcctggaccgtgcgcccaccccgggcgagcgccggctcgatgccgcggtggccgac
aacatcagtcaggcactgatgccgatcgcctcgtactcgcggggccatgcgctggcgggg
ggacgcccgtccgcggcgaagaccggcacggcgcagctcggggacaccggtgagaacaag
gacgcctggatggtcgggtacacgccgtcgctggcgacggcggtgtggatcggcaaggcc
gacgccaccgccatcaacaacagctggggcggcctgatctacggttcgggtctgccgtcc
gacatctggaaagacacgatggacggcgccctcgaagacaccgattgggaagacttcccg
tggcccgacccgatcggcggccaagccggtgtgcccacgtggaccggtcaaaccagcggc
gacggaacgggacccggcaccagcggggttgtcccgccgcccggtgctcccactcccgcg
cccgtcgaggttccgcccccggcggccgtcccggtcccgcccgtcccgccggtgcccgca
cccgtcccggcgccgacccagatcgaaatcctcccgggcgtcatcatcccgctgccgggt
tag
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