Rhodococcus opacus PD630: Pd630_LPD07984
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Entry
Pd630_LPD07984 CDS
T03071
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
roa
Rhodococcus opacus PD630
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roa03000
]
Pd630_LPD07984
03036 Chromosome and associated proteins [BR:
roa03036
]
Pd630_LPD07984
Transcription factors [BR:
roa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pd630_LPD07984
Chromosome and associated proteins [BR:
roa03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Pd630_LPD07984
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
HTH_24
P22_Cro
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AHK35170
LinkDB
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Position
complement(8307049..8307924)
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AA seq
291 aa
AA seq
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MDLDLASLRTFAAVIDEGTFDAAARVLHITPSAVSQRIKALEQQVGRVLVQRAKPVRATE
SGHVVLTLARQMAHLEREAMSSLNPEEATTSTLSLVVNADSLSTWMIPALARLAPEHRAL
FDLHREDEFHSTTLLKEGTVMAAVTSVPEAVQGCTVEKLGSMRYRALCSRDYAERWLPDG
PAPDALAVAPMLDFDRKDELQARFLRVFTRRRLQPPRHFVPGSSAFSDAVRHGLGWGLLP
ELHTGDDHGLVELDPSRPIDVPLYWQRWKLDSPILAALTTAVRDGAREALR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggacctggacctggcttctctccgcacgttcgcggccgtgatcgacgaaggcacgttc
gacgccgcggcccgggtactgcacatcacgccgtccgcggtgagccagcggatcaaggca
ctcgagcagcaggtcgggcgcgtcctggtgcagcgggccaagccggtccgggcaaccgag
tccggtcacgtcgtgctcacgctcgcccgccagatggcccacctcgagcgcgaggcgatg
tcgtccctcaatcccgaggaggcgacgacgagcactttgtcgctggtcgtcaacgcggat
tcgctgtccacgtggatgattccggcactcgcccgcctggcgccggagcatcgggcgctg
ttcgatctgcatcgggaagacgaattccactcgaccaccctgctgaaggagggcacggtg
atggccgcggtgacgtccgtcccggaggcggtgcagggctgcaccgtggagaagctgggg
tcgatgcggtaccgcgcgctctgcagccgcgactacgccgaacgctggctccccgacggc
ccggcaccggacgccctcgcagtggcaccgatgctcgacttcgaccgcaaggacgaactg
caggcccggttcctgcgcgtcttcacacggcgccgactgcagccgccgcggcatttcgtt
cccgggtcttcggcattctccgacgccgtccgccacggactgggctggggactgctgccg
gagttgcacaccggcgacgaccacgggctcgtcgaactcgacccgtcccgcccgatcgac
gtcccgctgtactggcagcggtggaagctggactcgccgatcctcgcggcgctcaccacc
gcggtccgggacggggcgcgcgaagcgttgcggtga
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