Rhodococcus opacus PD630: Pd630_LPD10030
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Entry
Pd630_LPD10030 CDS
T03071
Name
(GenBank) hypothetical protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pd630_LPD10030
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Gene cluster
GFIT
Motif
Pfam:
TraG-D_C
T4SS-DNA_transf
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AHK35480
LinkDB
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Position
p2:23013..24698
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AA seq
561 aa
AA seq
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MYEAGTPLWMLIGIVATVVILIVALAAAAWKFVPRSSARAKLRSTKDLDDMLRRGAAEKG
VGLRASIGGVEEANVRKLAKDTDIRELAVAIGRIGKKVLYKSYEDFTIIFMGPRSNKTSA
VAVPRILSAPGPVVSTSNKPDLWILTSALRELVGPIYAFDPGQIAYAPQTWWWNMIGHVK
TLKDANAIADNFLDDTGGSSDRADPFFTPTSRNLIGWTMLAAALEDGRTMRDVLEWIITA
SATPRDILHKHGRRKEALAYGLVLELPNDTKGGVYGGAGTALACLQDEDTLKWVTPPETW
ETKPQGAAPIEELDLWTLFAYEDGKAPTLYLMSQEGSSSAGPVLATMVERIFTIGDLAAS
AQGGRVDPPMTIVLDECANICRIKKLPDLASHLGSKSICVDAIFQSEAQAKSVWGHDKYD
ALWTASTVRICGAGLQDKAFAEKLSALIGTHKIREKNYSSGRGGGSTSEHQVREAIMPPE
DVAAMKKENALLIRQGSKPVLMDLMPWYKEPDSADINAVRKIATQQIQQAAVEALGADNP
LGRALQAKQIKDKALEHSGRP
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggccggcactccgttgtggatgctgatcgggatcgttgcaacggtggtgatc
ctgatcgtcgccctggcggccgccgcatggaagttcgttccccgcagcagtgcccgcgca
aagctgcggagcaccaaggatctggatgacatgctccggcgtggcgccgccgagaagggc
gtcgggctgcgggcatcgatcggcggtgtggaggaagcgaacgttcgcaaactcgccaag
gacaccgatattcgtgagctcgcagtggcgatcggacggatcgggaagaaggttctctac
aagtcgtatgaggacttcacgatcatcttcatgggtccccggtcgaacaagacctccgcc
gtcgcagtgcctcgaatcctgtctgcgcctggcccggtggtgagtacctcgaacaagcct
gacctgtggattctgaccagcgcgctacgtgagctggtggggccgatctacgctttcgac
ccgggccagatcgcctatgcgccgcagacctggtggtggaacatgatcggtcacgtcaag
acgctcaaagatgccaatgccatcgccgacaacttcctcgatgacaccggcggtagcagc
gaccgcgccgatcccttcttcaccccgacgtcccgcaatctgatcgggtggacgatgctc
gctgccgcgctcgaggacgggcgcaccatgcgcgacgtcctggaatggatcatcaccgcc
tccgccactccgagggacatcctgcacaagcatggccgccgcaaggaagcgttggcatac
ggtctcgtgctcgaactgccgaacgacaccaaaggtggtgtgtacggcggggcgggcacc
gccctggcctgtctgcaggacgaggacaccctcaagtgggtgactccgcccgaaacgtgg
gagaccaagccgcaaggcgcggcaccgatcgaggaactcgacctgtggacgctgttcgcc
tacgaggatgggaaagcacccacgctgtacctgatgtcgcaggagggctcgtcctccgct
ggtcctgtactggcgacgatggtggagcggatcttcacgatcggcgacctggcagcctcc
gctcagggtgggcgggtcgatccaccgatgaccatcgtcttggatgaatgcgcaaacatc
tgccgcatcaagaaactcccggaccttgcctcccacctgggctcgaagtcaatctgcgtc
gacgcaatcttccagtccgaggcacaggccaagtcggtctggggccatgacaaatacgac
gcactctggacggcgtcgacagtgcggatctgcggtgcaggtctgcaagacaaagccttt
gccgagaagctgtcggcgttgatcggcacgcacaagatccgcgagaagaactactccagc
ggacgcggcggggggtcgacgtcagagcaccaggtacgcgaagcgatcatgccacccgag
gacgttgcggcgatgaagaaggagaatgcgctgctgatccgtcagggctctaagcctgtg
ttgatggacctgatgccctggtacaaggagcccgactccgccgacatcaatgccgtccgc
aagatcgccacccaacagattcagcaggctgccgtagaggccctcggcgccgacaatcca
ctcggacgggcgttgcaggccaaacagatcaaggacaaggccctcgaacattccggtcgg
ccatga
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