Rhodococcus opacus PD630: Pd630_LPD16017
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Entry
Pd630_LPD16017 CDS
T03071
Name
(GenBank) Uncharacterized protein y4yA
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00300
Lysine biosynthesis
roa00470
D-Amino acid metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01230
Biosynthesis of amino acids
Module
roa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pd630_LPD16017
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pd630_LPD16017
Enzymes [BR:
roa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pd630_LPD16017
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Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHK35976
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Position
p8:complement(15847..17223)
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AA seq
458 aa
AA seq
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MNRLQSVRLPPLTTPWTDAVTGDARLLRSVSDAFGGPVHLLDPARFTANTRDFAAAFDDA
AVTGSVYFGKKANKASAFVDAIADLVTDDRRSGRSRRFGIDVASAGEFRQALAAGVRGVD
LLVTGPHKPAELLTLAVRHDAIVTVDSPTELKSLADLSRGLKVRIMLRVLPPGSTSRFGM
TDDEVVFAEKLATERKNDITLVGYSFHLSGYSIGDRRDQAHRLIERIRAVRRSGLAPTTI
SIGGGLPISYVQHEHWQQFLDPQAGHIFHAGKTFESYYPYHSATTGAAALRAILTETDSG
GAPLAHVCQDNDISMFVEPGRALLDRAGITVFPVLGVKDRNPGIIVIDGTSLSLSEQWFD
TEFVPDPQLVSEHTPMNELPFFASVGAATCLESDMLTWRVIEFPYRPATGSYLVYHNTAG
YQMDSNESAFHDTPVPPKVVVTLDDGHPRWTLDRRETY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccgcctgcagtcggtacgactgccaccgttgaccacgccgtggaccgacgccgtc
accggcgacgcccggctgctgcgctcggtgtcggacgcgttcggcggccccgtccacctc
ctcgaccccgcgcgattcaccgccaacacgagggatttcgccgccgcattcgacgacgcc
gccgtcaccggctccgtgtacttcgggaagaaagccaacaaggcgtccgccttcgtcgac
gcgatcgccgacctcgtcaccgacgaccgccgcagcgggcgcagtcgccggttcgggatc
gacgtggccagcgccggcgagttccgccaggcactggcggcaggggtgcgcggggtggat
ctgctggtcaccggaccccacaagccggccgaactcctcaccctcgccgtgcgtcacgac
gcgatcgtcaccgtcgattcacccaccgagctcaagtccctcgccgacctctcacggggg
ctgaaggtccgcatcatgctgcgggtgcttcccccgggcagcaccagccggttcgggatg
accgacgacgaggtcgtgttcgcggagaagctggccaccgaacggaaaaacgacatcacc
ctggtcggttacagcttccacctgtccggatacagcatcggtgaccgccgcgaccaggcg
caccggttgatcgagcgcatcagggcggtccgccgctccggccttgcccccaccacgatc
agtatcggcggtggccttccgatcagctatgtgcagcacgagcattggcagcagttcctg
gacccgcaggccgggcacatcttccacgccgggaagacgttcgagagctactacccgtac
cattcggccaccaccggcgccgccgcacttcgggcgatcctcaccgagactgattccggc
ggcgccccgctcgcccacgtgtgccaggacaacgacatctcgatgttcgtcgaaccgggc
cgtgcgttgctcgaccgcgccgggatcaccgtctttccggtcctcggggtgaaggaccgc
aaccccgggatcatcgtcatcgacggcaccagcctgtccctgtccgagcagtggttcgac
accgagttcgtccctgaccctcaactggtctccgaacacacccccatgaacgagttaccg
ttcttcgcctcggtgggtgccgcgacgtgtctggagtcggacatgctcacctggcgggtg
atcgagttcccgtaccgccccgccaccgggtcctacctcgtctaccacaacaccgccgga
taccagatggactcgaacgaatccgcattccacgacaccccggtccccccgaaggtcgtg
gtgaccctcgacgacggacacccccgatggaccctcgaccgccgcgaaacctactga
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