Rhodococcus opacus PD630: Pd630_LPD16022
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Entry
Pd630_LPD16022 CDS
T03071
Name
(GenBank) Oligopeptide-binding protein AppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
roa
Rhodococcus opacus PD630
Pathway
roa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pd630_LPD16022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roa02000
]
Pd630_LPD16022
Transporters [BR:
roa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pd630_LPD16022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHK35981
LinkDB
All DBs
Position
p8:complement(22721..24226)
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AA seq
501 aa
AA seq
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MFAGLGTTALIALAACSSEDSSAGGSGNPTAGGTLRVGALGQPSKIEQDPHQTLSNDSDF
LITSLVYDALTVPGADPNVAPRLASEWVQLDDLRKWKFTIADGARFHDGTPVTSDDVVWS
LRRLREITGETKVPVASAQDIVADGPNAVIITTASPNRELPLLLRLMTFTVKKDTTDFTA
PVGTGPFKLESYRDGNARLIRNENWHGGTPLLEAIEVTRFDSTTAMANAVIAGQIDLASN
VGAVAGRTADGRGELTVVRRSNDVVIPIVMRTSDGPFADPRVREALRLAVDRDAMVKQVT
SGYGTIANDVLGTGDPTYDSSLEQRSREIDRAKQLLAEANFDTGQTYTLFTKEEAAGEVD
SAKLFATQAAEIGVKIDVVTQDANVFYDDTWLKAPLYTANWGTNDSVIFFASKTMYSGTK
WNESGFKDPEFDAAYLEALSAADETTYQAASKKLQEIQYDRGGYLVWGMADGVDVASSKV
QGLPQLGGYGRVQLEKAWLSS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccggtctcggcaccacggcgctgatcgccttggctgcgtgcagttccgaggat
tcgtcggcgggtgggtccggaaatccgacggccggtggcacgctgcgggtcggcgcgctg
gggcagccgtcgaagatcgagcaggatccccatcagaccctcagtaacgacagcgacttc
ctgatcacctcgctggtctacgacgccctgaccgtgccgggcgccgatcccaacgtcgcg
cctcgcctggcgtcggagtgggtgcaactcgacgacctgcgcaagtggaagttcacgatc
gccgacggtgcgaggttccacgacggcaccccggtcacctcggacgacgtggtgtggtcg
ctgcgccggctgcgcgagatcaccggcgagacgaaggttcccgtcgcctccgcccaggac
atcgtcgcggacggcccgaacgccgtcatcatcacgacggcctcaccgaaccgggaactg
ccgctgctgctgcggctgatgacgttcaccgtcaagaaggacaccaccgacttcaccgca
ccagtggggacgggaccgttcaagctcgagtcctaccgcgacggcaatgcccgcctgatc
cggaacgagaactggcacggcggaaccccgctgctggaggcgatcgaggtgacccggttc
gacagcacgacggccatggccaacgcggtgatcgccggtcagatcgatctcgcctccaat
gtcggggccgtcgccggccgcacggccgacggccggggtgagctgaccgtggtccgccgc
tccaacgacgtggtgatcccgatcgtgatgcgcacctcggacggaccgttcgccgatccg
cgggtgcgggaggcactgcggttggccgtcgaccgcgacgccatggtcaagcaggtgacc
tccgggtacgggaccatcgccaacgatgtgctcggcaccggcgatccgacgtacgactcg
tcgctcgagcagcgcagccgcgagatcgaccgcgcgaagcagcttctggcggaggcgaac
ttcgacaccggccagacgtacacactgttcacgaaggaggaggcggccggtgaggtcgac
tccgccaagctgttcgccacgcaagccgcggagatcggcgtcaagatcgacgtcgtgacc
caggacgcgaacgttttctacgacgacacctggctcaaggcgccgctctacaccgcgaac
tggggcaccaacgactcggtgatcttcttcgccagcaagaccatgtactccggcaccaag
tggaacgaatccggtttcaaggaccccgaattcgacgccgcctacctcgaggccctctcg
gccgccgacgagaccacctaccaggcggcgagcaagaagctgcaggagatccagtacgac
cgcggcggctacctggtgtggggtatggccgacggcgtcgacgtcgcctcgtccaaggtg
cagggcctgccccaactcggcggatacggccgcgtccagctcgaaaaggcgtggctgtcg
agttga
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