Blautia obeum: CK5_21720
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Entry
CK5_21720 CDS
T02605
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
rob
Blautia obeum
Pathway
rob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CK5_21720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rob03400
]
CK5_21720
DNA repair and recombination proteins [BR:
rob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CK5_21720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CK5_21720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DPPIV_rep
SWI2_SNF2
AAA_22
Kinesin
NAGLU_C
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBL23529
UniProt:
D4LRX1
LinkDB
All DBs
Position
2194010..2195998
Genome browser
AA seq
662 aa
AA seq
DB search
MDHFELHSEYKPTGDQPQAIEKLVKGFKEGNQFETLLGVTGSGKTFTMANVIAQLNKPTL
VLAHNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSTDTYIAKDASTNDEIDK
LRLSATAALCERRDVIVVSSVSCIYGLGAPEEFFDMMISLRPGMEKDRDDVIKELIDIQY
NRNEMDFHRGTFRVRGDVLEIFPANYSDHAIRVEFFGDEIDRITEVDVLTGEIRSELKHA
AIFPASHYVVPQSQIQRAADAILEEMKEQVACFKGEDKLIEAQRIAERTNFDVEMMKETG
FCSGIENYSRHLTGLAPGQPPYTLMDYFKDDFLLIIDESHKTVSQVGGMYAGDQSRKQTL
VDYGFRLPSAKDNRPLSFDEFENKLDQVMFVSATPGQYEADHEMLRAEQIIRPTGLLDPK
VEVRPVEGQIDDLIGEVNKEVEKGNKILITTLTKRMAEDLTDYMKDVGIRVRYLHSDIDT
LERAEIIRDMRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSEVSLIQTIGRA
ARNSEGHVIMYADVMTDSMRKAIQETERRRSIQEAYNKEHGITPTTIKKAVRDLITVSRA
VAETEDKLKKDPESMTRKELTKLIGQVEKQMRAAAADLNFEQAAELRDKMIELKKNLDEM
DS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaattacactctgaatataagcccaccggtgaccagcctcaggcaatc
gagaaactggtcaagggattcaaagaaggaaaccagtttgagactctgctgggagttacc
ggttccggtaagacctttaccatggcaaatgttatcgcacaattaaataaaccaactctg
gtacttgcacacaataaaacactggcggcgcagctttacggcgaaatgaaagaattcttc
cctgataacgcagtggaatattttgtttcctattacgattattaccagccggaggcatat
gtaccatctacagacacctatattgcaaaagatgcctccacaaatgatgaaatcgataag
ctgcgattatcggcaacggcggctctctgtgagcgcagggatgtaatcgttgtatcctct
gtttcctgtatttatggtctgggtgcgccggaagagttctttgatatgatgatctcactt
cgtccgggaatggagaaagacagagatgatgtgatcaaagagctgatcgacattcagtac
aaccgtaatgaaatggattttcatcgaggtacattccgtgtgcggggtgatgtactggag
atttttcctgccaactattctgaccatgcgatccgtgtagaatttttcggagacgagatc
gaccgcattacagaagtagatgtcctgacgggcgaaatccgcagtgaactgaaacatgct
gcgatttttccggcatctcattatgttgtgccacagagccagattcagagagccgcagat
gccatcctcgaagaaatgaaggaacaggttgcctgtttcaaaggtgaggacaagctgatc
gaagcacagcgtattgccgagagaacgaatttcgatgtagaaatgatgaaagaaaccgga
ttctgttccggcattgagaattactcacgacaccttaccggactggcaccgggacagccg
ccgtatacgctgatggactattttaaagatgattttcttcttattatagatgagtcccac
aaaactgtctcacaggttggcggtatgtatgccggtgatcagagccgtaaacagacactg
gtggattatggattccgcctgccgtctgcgaaggacaaccgtccgttgagttttgatgaa
ttcgaaaacaaactggatcaggtgatgtttgtctcggcgacaccgggacagtatgaggcg
gatcatgagatgctccgcgcagagcagatcatccgcccgaccggacttctggatccgaag
gttgaggtgcgtccggtggaagggcagatcgatgacctgatcggagaagtcaataaagaa
gtagaaaagggcaataagattcttatcacgacactgacaaaacgtatggcggaagatctg
acggattatatgaaagatgtcggcattcgtgtacgttatctccactcagatattgatacc
cttgagcgcgcggagatcatcagggatatgcgtctggatgtttttgatgtactggtagga
atcaatcttctgcgagaaggtctggacattccggaaatcacactggtagccattctggat
gcggataaagaaggattcctgcgttcagaagtttctctgatccagacgatcggacgtgct
gcccgtaacagcgaaggtcatgttattatgtatgctgatgtgatgacggattctatgcga
aaggcaattcaggagactgagcgaagaagaagtattcaggaggcatacaataaagaacat
ggaattacaccgaccacgatcaaaaaagcggtacgcgatctgattactgtttccagggcc
gttgctgagacagaagataaactgaagaaagatccggaatccatgacaaggaaagaactg
acaaaacttatcggacaggtggaaaagcagatgcgcgcagcggccgcagacctgaatttc
gaacaggccgcagaactgcgtgataagatgatcgagcttaagaaaaatctggatgagatg
gattcctga
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