Blautia obeum: CK5_29780
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Entry
CK5_29780 CDS
T02605
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rob
Blautia obeum
Pathway
rob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK5_29780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rob03019
]
CK5_29780
03016 Transfer RNA biogenesis [BR:
rob03016
]
CK5_29780
Enzymes [BR:
rob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CK5_29780
Messenger RNA biogenesis [BR:
rob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CK5_29780
Transfer RNA biogenesis [BR:
rob03016
]
Prokaryotic type
tRNA degradation factors
CK5_29780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
DUF6160
KH_2
KH_NusA_1st
ATR13
SPATA25
Mug135_C
Motif
Other DBs
NCBI-ProteinID:
CBL24220
UniProt:
D4LTW2
LinkDB
All DBs
Position
complement(3010810..3012903)
Genome browser
AA seq
697 aa
AA seq
DB search
MYKSYSMELAGRTLTVDIGRVAKQANGAALMHYGDTTVLSTATASKEPREGIDFFPLSVE
YEEKMYAVGKIPGGFNKREGKASEHAILTSRVIDRPMRPLFPKDYRNDVTLVNMVMSVDP
ECNPEIPAMLGSSIATCISDIPFDGPCATTQVGLIDGEFIINPSLAQKELSDLQLTVAST
REKVIMIEAGANEVPEDTMIEAIYKAHDVNQEIIRFIDKIVAECGKEKHLYASCAVPEEL
FEAIKKIVPSEEMEEAVFTDDKQTREENIREITARLQDAFVDNEEWLAVLGEAVYQYQKK
TVRKMILKDHKRPDGRQITQIRPLAAEVDIIPRVHGSAMFTRGQTQICTMTTLAPLSEAQ
RIDGLDEFETSKRYMHHYNFPSYSVGETKPSRGPGRREIGHGALAERALVPVLPSAEEFP
YAIRTVSETFESNGSTSQASICASTMSLMAAGVPIRKPVAGISCGLVTGATDDDYIVLTD
IQGLEDFFGDMDFKVAGTHDGITAIQMDIKIHGLTRQIVEEAIRRTKEAREYILTEVMEK
CIAAPRDHVNKYAPKIVQIQIDPQKIGDVVGQRGKTINAIIERTGVQIDITDEGAVSICG
VDQHGMDEAKKMIKTIATDFEAGQIFEGTVVSIKEFGAFVEFAPGKEGMVHISKISDHRI
NRVEDVLTLGDKVKVICLGKDKMGRMSFSIKDVPEEA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaagttattctatggaattagccggcagaacgctgactgtagatatcggtcgt
gttgcaaagcaggcaaatggtgcagcgctgatgcattacggtgacactactgtactttcc
acagcaacagcatccaaagagccgagagaaggaattgatttcttccctctgagcgttgaa
tacgaagaaaaaatgtatgcagtaggcaaaattccgggtggattcaataagagagaagga
aaggcaagcgagcatgcaatcctgacttcccgtgttatcgaccgtccgatgcgtccgctg
ttcccaaaagattacagaaacgatgttactctggtaaacatggttatgtctgtagatccg
gaatgcaatccggaaatcccggctatgcttggttcttccattgcaacctgtatttcagat
attccgtttgatggtccatgcgcaaccacacaggtaggtctgatcgatggcgagttcatc
atcaacccgtcacttgctcagaaagaactttctgatcttcagcttactgttgcttctacc
agagaaaaagttatcatgatcgaagccggtgcaaatgaagttccggaagacaccatgatc
gaagcaatttacaaagcacatgatgtaaaccaggagatcatccgctttatcgataagatt
gttgcagagtgcggcaaagaaaaacacctttatgcttcctgtgcagttccggaagaactg
tttgaggcaatcaaaaagattgttccttctgaagaaatggaagaagctgtattcacagac
gacaaacagacaagagaagaaaatatccgtgagattacagcaagacttcaggatgcattt
gtagacaatgaagaatggctggcagttctcggtgaggctgtataccagtaccagaagaag
actgtacgtaagatgatcctcaaagatcacaaacgtccggacggccgtcagatcacacag
atccgtcctctggctgcagaagtagacatcatcccgagagttcatggttccgcaatgttc
acacgtggacagacacagatctgtacaatgacaactctggctccgctttccgaagcacag
agaatcgacggactggatgaattcgaaacatccaagagatatatgcaccactacaacttc
ccgtcctattctgtaggtgagaccaaaccgtccagaggaccgggacgtcgtgaaatcgga
catggagcattggctgagcgagctcttgtaccggtacttccgtcagcagaggaattcccg
tacgcaatccgtacagtatctgagacattcgaatccaacggttctacttctcaggcgagt
atctgtgcatctaccatgtctcttatggcagcaggtgtaccgatccgcaaaccggttgca
ggtatttcctgtggtctggtaacaggtgctacagatgatgattacatcgttctgacagat
atccagggtctggaagacttcttcggagatatggacttcaaggttgccggtacacatgac
ggtattactgcaattcagatggatatcaagattcatggtctgacaagacagatcgtagaa
gaagcaatccgcagaacaaaagaagcaagagagtacatcctcacagaggttatggaaaaa
tgtatcgcagcacctcgtgatcatgtaaacaaatatgcaccgaagatcgttcagatccag
atcgatcctcagaagatcggtgatgtcgtaggtcagagaggaaagaccatcaacgcgatc
atcgagcgtacaggtgtacagatcgacattacagatgaaggagcagtctctatctgcggt
gttgaccagcacggtatggatgaagcaaagaaaatgatcaagacgatcgcaacggatttc
gaagcaggacagatttttgaaggtactgttgtaagcatcaaagaattcggtgcattcgtt
gagtttgctcctggcaaagaaggtatggttcatatctccaagatcagtgatcacagaatc
aaccgtgtagaagatgttctgactcttggtgataaggtaaaagttatctgccttggtaaa
gacaagatgggaagaatgagtttcagtattaaggatgtaccggaagaagcataa
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