Romboutsia sp. CE17: HF520_01945
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Entry
HF520_01945 CDS
T06535
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
roc
Romboutsia sp. CE17
Pathway
roc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HF520_01945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roc02000
]
HF520_01945
Transporters [BR:
roc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HF520_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
ABC_membrane_2
Zeta_toxin
SMC_N
DUF87
TsaE
AAA_15
AAA_14
AAA
AAA_30
DUF5906
ABC_membrane_3
AAA_23
nSTAND3
AAA_18
AAA_5
ResIII
IstB_IS21
AAA_29
AAA_7
AAA_16
DEAD
AAA_33
AAA_28
AAA_24
DO-GTPase2
Cpta_toxin
Neurensin
Motif
Other DBs
NCBI-ProteinID:
QJA10127
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Position
392961..394787
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AA seq
608 aa
AA seq
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MGGPMGRGPKMVGEKAKDFKGTMKTLLGYLGKFKTSIILVFIFAIGSVSFSVVGPKILGK
ATTKIFEGLVAKVSGAAGAGIDFDSIGKILLTLIGLYILSAIFSFIQGFVMSGISQKIAY
NLRNELSQKINRMPMKYFDSKTHGEVLSRITNDIDTLSQSLNQSMTQLITSVTTIIGVLV
MMLSISWMMTGVTLLILPLSMILISFIIKRSQKYFKAQQEYLGHVNGQVEELYGGHNIVK
VFNGEDEAIEKFNKLNDTLYQSAWKSQFLSGIMQPLMMFVGNLGYVVVAILGGWLAIRKT
IEVGDIQSFIQYVRNFTQPLSQVAQVTNLLQSTAAAAERVFEFLDEEEEDQVVENAVKVD
GLEGKIDFEHVRFGYNPNKIIIKDFTAHVKPGQKIAIVGPTGAGKTTIVKLLMRFYDVNS
GTILIDNHNIKDFNRSELRQLFGMVLQDTWLFNGSIKDNIRYGKLDATDEQVIEAAKAAH
VHHFIKTLPDGYDMILNEEASNVSQGQKQLLTIARAILADPKILILDEATSSVDTRTEVL
IQKAMDNLMENRTSFIIAHRLSTIKNADLILVMNEGDIIEIGNHEKLLAQKGFYANLYNS
QFEKDEAI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtccaatgggacgtggacctaaaatggtaggagaaaaggctaaagatttcaag
ggtacaatgaagacgttattagggtatttgggtaaatttaaaacatctataattcttgtt
ttcatatttgccataggaagtgtttcattctctgttgtaggacctaaaatattaggtaaa
gcaactactaaaatatttgaagggttagttgcaaaagtttcaggggcagctggagctggt
atagattttgattctataggaaaaatattattaactttaataggtttatatatattaagt
gcaatattttcatttatacaaggttttgttatgagtggaatatctcaaaaaattgcctat
aatttaagaaatgagttatcacaaaagataaatagaatgcctatgaagtactttgatagt
aaaactcatggtgaagtattatctagaataactaatgatatagatactcttagtcaaagt
ttaaaccaaagtatgactcagcttataacatctgtcacaactattataggtgttttagta
atgatgttatctataagctggatgatgactggtgtaacattacttatattaccattatca
atgatattaatatcatttataataaagagatctcaaaaatactttaaagctcaacaggag
tatttaggtcatgtaaatggtcaagttgaggagttatatggaggacataatatagttaaa
gtatttaatggtgaagatgaagctatagaaaaatttaataaattaaatgatactttatat
caatcagcttggaaatcacaatttttatcaggtataatgcaaccacttatgatgtttgtt
ggtaacttaggttatgtagtagttgcaatacttggtggatggttagctataagaaaaact
atagaagttggagatatacaatcatttatacaatatgtaagaaactttactcaaccttta
tctcaagtggctcaagtaactaacttattacaatctacagcagctgcagcagaaagagta
tttgaattcttagacgaagaagaagaagatcaagtagttgaaaatgcagtcaaagttgat
ggtttagaaggtaaaattgattttgagcatgtaagatttggatataatcctaataaaata
ataataaaagactttactgctcatgttaagccaggacaaaaaatagctatagtaggtcct
acaggagcaggtaaaacaactatagtaaaacttcttatgagattttatgatgttaactca
ggtacgatacttattgacaatcataatataaaagattttaatagaagtgaattgagacaa
ttatttggaatggttcttcaagatacatggctatttaatggaagcataaaagataatatt
agatatggaaagcttgatgcaactgatgaacaggtaatagaggcagctaaagcggcacat
gtacaccattttataaaaacattaccagatggatatgatatgattcttaatgaagaagca
agtaacgtatctcaaggtcaaaaacaattattgacaattgctcgtgcaatactagcagat
cctaagatattaatattagatgaagctacaagttcagttgatacaagaacagaagtatta
attcaaaaggctatggataaccttatggaaaatagaacaagcttcataattgcgcataga
ttatctactataaaaaatgcagatttaatattagtaatgaacgaaggggatataatagaa
ataggtaatcatgaaaagttattagctcaaaaaggattctatgctaatttatataactct
caatttgaaaaagatgaagctatataa
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