Romboutsia sp. CE17: HF520_02475
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Entry
HF520_02475 CDS
T06535
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03420
Nucleotide excision repair
roc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF520_02475
03430 Mismatch repair
HF520_02475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_02475
Enzymes [BR:
roc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF520_02475
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF520_02475
MMR (mismatch excision repair)
Other MMR factors
HF520_02475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_11
DEAD
ResIII
AAA_22
DUF87
NPHP3_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QJA07874
UniProt:
A0A6H1WXD3
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All DBs
Position
508956..511163
Genome browser
AA seq
735 aa
AA seq
DB search
MSKINYREDQIPIINYTSGTMAVPAVPGAGKTFIVTNLVAKLLEENYNKKGKILILTYMN
SAVNNFKGRIKKILEEKNIQNSNAYEVMTIHSLAVKIIKEKPEIIMLNEEFSIADDLQKN
IILTDCINRYRSSGGEKIFNFFLKEQKSERWRDISLENWDRGFYDLIGNSISELKYKDIT
PDKLEDNISSDYKGMLRIVLPIYKEYDRRLKQQGLLDYDDILILGYKALIIDEGLRTKFQ
NRYTYVFEDECQDSNEIQGKIIKVICEKNSNLVRVGDINQSITGTFSSADPKYFKEFIET
ADYCYRMDMSNRSSKDILDLANELVRYVTKDFNQVECKDALEDMKVRTVPKNKGYKENPE
PTNYNINTKLYNCWKDEINETIRFTKGIKKKYPDKSIGILVPYNDHVNQVGRELEKAGLE
FEELGPNSSNKRNVLNNIAFIIDFILNCDNINKFITVLDRVFIHTENEQGKKDFIEILKN
YKIEELIYDENIQENLIIDIDSEVYKGFNKGVKTLKKILEYPIVRLDTLILFIGEKLNLE
NEDRAVVDYIAFYVKFLLFENVNMSLKDVYEILANTRNKVFSHIVEVVYEINGYEPMPGS
ITVCNYHKSKGLEWDCVFLLGLSEFNFPDNVNQKFQCDKWYLKDKYKNPEAIIKKEIDAI
VEGYNGVDYEQQTKIDIIKEKIRLLYVGITRAKEMLIISTCLYKDENDINNDRKKQNPSI
YWYKLNDYIKLKRER
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagataaattatagagaagatcagattcctataataaattatacttcgggaact
atggcagtaccagcagtgcctggagcaggtaaaacctttatagttacgaatttagtagcg
aaacttttagaagaaaattataataaaaaaggaaaaattttaattcttacttatatgaat
agtgcggttaataactttaaaggcagaataaaaaaaatattggaagaaaagaacatacaa
aattctaatgcatatgaagtaatgactatacatagtttggcagttaagattattaaagaa
aagccggaaataataatgttaaatgaggaattcagcatagctgatgatttgcaaaaaaat
ataatattaactgattgtataaatagatataggtctagtggaggagagaaaatatttaac
ttctttcttaaggagcaaaaaagtgaacgatggagagatataagtcttgaaaactgggat
agaggtttttatgatttaattggaaactctattagtgaacttaaatataaagatattact
ccagataaattagaagataatatatcaagtgattataaaggaatgcttagaatagtattg
cctatatataaagaatatgataggagactaaagcaacaagggttgttagactatgatgat
attttaatactaggatataaagcattgattatagatgaaggactaagaactaaatttcaa
aatagatatacgtatgtatttgaagatgagtgtcaagattctaatgaaatacaaggtaaa
ataatcaaggttatatgtgaaaaaaatagtaacttggttagagttggagatataaatcaa
agcataacgggtacattttcatcagcggatccaaaatacttcaaggagtttatagaaaca
gctgattattgttacagaatggatatgtcaaatagaagttctaaagatatactagattta
gcaaatgaactagttaggtatgtaactaaagattttaatcaagttgaatgcaaagacgca
ttagaagatatgaaggtaaggactgtacctaagaataagggttataaagaaaacccagaa
ccaactaattataatataaatacgaaattatataattgctggaaagatgaaataaatgaa
acaataagatttacaaaaggtattaagaaaaagtatccagataaaagtataggaatacta
gttccatataacgatcatgtaaatcaagtaggtagagaactagaaaaagctggattagag
tttgaagagttaggtccaaattctagtaataagagaaatgtattaaataatattgctttt
ataatagattttattttaaactgtgataatataaataagtttataactgtattagatagg
gtatttatacataccgaaaatgaacaaggtaagaaggattttatagaaatactaaaaaat
tataaaatagaagagcttatttatgatgaaaatattcaagaaaatctaattatagatata
gatagtgaggtatataaaggatttaataaaggtgtaaaaaccttgaagaaaattttagag
tatcctattgtaagattagatacacttattttatttatcggagaaaaattaaatttggaa
aatgaagatagagcagtagtagattatatagctttttacgtaaaatttttactatttgaa
aatgtaaatatgagtttaaaagatgtatatgaaatattagctaatactagaaataaagtg
ttttcacatatagtagaagttgtatatgaaataaatggatatgagcctatgccaggtagt
ataactgtgtgtaattatcataagtccaaaggtttagagtgggattgtgtatttttacta
ggtttaagcgaatttaatttcccagacaatgtcaatcaaaaattccaatgtgataaatgg
tatctaaaggataagtataaaaacccagaagctattataaaaaaagaaatagacgctatc
gtagagggatacaatggagttgattatgaacaacaaactaaaattgatataataaaagaa
aaaataagattattatatgtaggaataacaagagcaaaagagatgttaattatatctaca
tgtttatataaagatgaaaatgatattaataatgatagaaaaaaacaaaatccatctata
tattggtataaattgaatgattatattaaattaaaaagagagaggtga
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