Romboutsia sp. CE17: HF520_02485
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Entry
HF520_02485 CDS
T06535
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_02485 (addB)
Enzymes [BR:
roc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF520_02485 (addB)
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HF520_02485 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QJA07876
LinkDB
All DBs
Position
511906..515358
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AA seq
1150 aa
AA seq
DB search
MGLRFVIGRSGSGKSTYMLDEIKKKAQENETTPIIMLVPEQYTFEMEKRMSNLFSGNEKD
KFLRSRVLSFKTMSNIVFSHVGGLTNVNINSSGKAIITSSAIESVAKELNIFSKSATQSG
FITSVSDMISEFKQYNITPELLQHLSAEVENETLSLKLKDISKIYDAFEHKLHEKYVDSQ
DLLNLLADKIEACDYFDGCYIYIDEFTGFTPNQYRVIKSLMNKAKEVNISLTIDSIANFS
YNKTDAFSRTKFTYEKLNRIALEEGIKIEKPLNLNNGTIHRFKGNKELSHLERYYNAYPY
KVYDEETQNIQIKEFNNLYSEVEEIAKEIIYLVRDKKIRYKDITVVTRDLNRYDFLVHSI
FNEYQIPNFIDKKREAKSNPIIVLIISALEMKNRRYSYEAMFRYLKSGLLEIDNEDISLL
ENYVLANGIRGKKWFEEKWNYRVNANYSMEESDYEISLKERVNEIKERVISPIIKLQNKL
NGKKTVQELCQYVYEFLLDINIPTTIEKLICNFKDKGELDVANQYSQVWDIVIDILDQIV
EIMGDEKKSLDEFIRLISLGFDEYELGLVPPSIDQVLVSSVDRMKNPNTKYLYLIGTTDG
IFPLISKDSGLLSDNDRESLGDKGVEVDLDSKTKTFEEQFLVYKALTSTCENLIVTYPIS
DHEGKTLRPSVIVSRLKKIFPKIKNISYLLEAEESTDEDVLNKITVKAPTFNKLINEIKE
YDDKKEIKEIWLDIYRYFIQDDEYSNISKKVISGLNYTNQVRNVEEDKMKKLYQNSILSV
SRVEKYAQCPFAYFIQYGLKAKERKEYSFTAPDLGNFIHNILENFSKSLSKDNLQWKDID
INYIKDKVSILVDDIVGKIPGYILNSSERYKYLAFRLKNMLVAALNVIAEQIKQGSFEPS
DYEVEFGFNGKYPPIKLVLDNGEEINLIGKIDRVDEFEENDGKYIRIVDYKSGNKSISLS
DVYYGLQLQLLVYLDAILESASKGDGNLSPAAILYCRIDNPIAKFNEDKDDEEVREAILK
DMRMKGLIIKDAHIIKEMDKSLADGARKSSLVIPANLTKDGNIGKSTNGVTYEEFEILRS
YVKKTVKDLCKEMVSGNIGIDPYKNKNGTSCDFCSYSAICQFDTTMKDNKYRILNNKDNE
EVIKLMKGEI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggacttaggtttgtgataggtagaagtggaagcggaaagtctacctatatgttagat
gaaataaagaagaaagctcaagaaaatgaaacaactccaataataatgctagttccagaa
cagtatacctttgaaatggaaaaaagaatgagtaatttattctcaggaaatgaaaaagat
aaatttttaagatctagagtattaagttttaagactatgagtaatatagtcttttctcat
gttggtggattaacaaatgttaatataaattctagtggaaaggcaattattactagtagt
gcaatagaaagtgttgctaaagaattaaatatattttcaaaatcagcaacacaatcagga
tttataacatcagtttcagatatgatttctgaatttaaacaatacaatataactccagag
ttattacagcatttgagtgcagaagtagaaaatgaaactttaagtttaaagttaaaagat
ataagcaaaatatatgatgcttttgaacataagcttcatgaaaagtatgttgattctcaa
gatttacttaacttattagcagataaaatagaagcatgcgattattttgatggatgttat
atttatatagatgaatttacaggatttacaccaaatcagtatagggttataaaaagctta
atgaataaagcaaaagaagttaatatatctcttactatagatagcatagcaaacttttcg
tacaataagacggatgctttttcaagaacaaaatttacatatgaaaaattaaatagaatt
gcattagaagaaggtataaaaatagagaagcctttgaatcttaataatggaacaatacac
agattcaaaggaaataaagagttgagtcatttagaacgatattataatgcttatccatat
aaggtatatgatgaagaaactcaaaatatacagataaaggaatttaacaatttatattct
gaagtagaagaaattgctaaagaaataatatatttagtgagggataaaaaaattagatat
aaagatattacggtagtaactagagatttaaatagatatgattttttagtacattctata
tttaatgaataccaaatacctaattttatagataaaaaaagagaagctaaaagcaatccc
ataatagttctaataatctctgctttagaaatgaaaaacagaagatatagctatgaagct
atgtttagatacttaaaaagtggactattagaaatagataatgaagatataagtttactt
gaaaactatgtacttgctaatggtataagaggtaagaagtggtttgaagagaaatggaat
tatagagtaaatgctaattatagtatggaagaaagcgattatgaaatatctttaaaagag
agagttaatgaaataaaggaaagagttatttctccaattattaaactacaaaataagcta
aatggaaagaaaactgtacaagagctatgtcaatatgtatatgaatttttactagatata
aatattccaacaactatagaaaaattaatttgcaattttaaagataaaggagaactagat
gtagcaaatcaatattctcaagtttgggatatagtaatagatatacttgatcaaatagtt
gaaattatgggggatgaaaaaaaatccttagatgaatttataagacttataagtttagga
tttgatgagtatgaattagggttagtaccaccaagtatagaccaggtacttgttagtagt
gtagatagaatgaaaaatcctaatacaaagtatctttatttaataggtactactgatgga
atattccctttaatatcaaaagatagtggtttattaagtgacaatgatagagaaagctta
ggggataagggtgtagaagtagacttagatagcaaaacaaagacttttgaagaacaattc
ttagtgtataaggcactaacttcaacttgtgaaaacctaattgtaacttatcctatatca
gaccatgaaggtaaaacattaagaccatcagttatagtgtctaggttaaaaaaaatattt
cctaaaataaaaaatataagttatttgttagaagccgaagaatctacagacgaagatgta
ttaaataaaataactgttaaagcacctacttttaataaacttataaacgaaataaaagag
tatgatgataaaaaagaaataaaggaaatttggcttgatatatatagatattttatacag
gatgatgaatatagtaatatatctaaaaaagttatttctgggcttaattatacaaatcaa
gtaaggaatgtagaagaagataaaatgaaaaaactttatcaaaatagtatattaagcgta
tctagagtagagaaatatgctcaatgtccatttgcttactttattcagtatggacttaaa
gcaaaagaaagaaaagagtattcgtttacagcacctgatttaggaaactttatacataat
atattggagaacttttcgaaatctctttcaaaagataacttacaatggaaagatatagat
attaattatataaaagataaagtttcaatattagttgatgatatagtaggtaaaatacct
ggatatatactaaatagttcagaaagatataaatacttagcttttagattaaaaaatatg
ttagtagcggcattaaatgttatagcagagcaaataaagcaaggatcatttgaacctagt
gattacgaagttgaatttggatttaatggaaagtatcctcctataaagttagtgttagat
aatggagaagaaataaatctaataggtaaaatagatagagttgatgaatttgaagagaat
gatggaaaatatataagaatagttgattataaatcaggaaataaatctataagtttgagc
gatgtgtactatggtcttcaattacaactattagtatacttagatgctatacttgaaagc
gcaagtaaaggcgatggaaatttaagtccagcagcaattttatattgtagaatagacaat
cctattgctaaatttaatgaagataaagatgatgaagaagtcagagaggctatacttaaa
gatatgagaatgaaaggtttaataataaaggacgcccatattataaaagaaatggacaag
tctttagcagatggtgctaggaagtcttctctagtaatacctgcaaatctaactaaagat
ggaaacataggaaaaagtacaaatggggtaacctatgaagagtttgagattcttagaagt
tatgtgaagaaaactgttaaagatttatgtaaggaaatggtaagtgggaatataggtata
gatccatataaaaataaaaatggaacttcttgcgatttctgtagttattcagctatttgt
caatttgatactactatgaaagataataagtatagaattttaaataataaagataatgaa
gaagttattaaactaatgaagggagagatatag
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