Romboutsia sp. CE17: HF520_02540
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Entry
HF520_02540 CDS
T06535
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roc03009
]
HF520_02540
Enzymes [BR:
roc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HF520_02540
Ribosome biogenesis [BR:
roc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HF520_02540
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Methyltransf_7
Tim44
CACHD1_mid
Motif
Other DBs
NCBI-ProteinID:
QJA07886
LinkDB
All DBs
Position
531565..532467
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AA seq
300 aa
AA seq
DB search
MFNKKDQKYNLISYINEEDLTLKEILLDKLNFSVRSLSKMKREKSVLVNGEFKKLSSNIV
KGDLIEVRIDEDMANFEPQDLNLNIIYDDFDIIMVNKPPFMVVHPTKSHFDKTIANGVTD
YIIKKNEKVKVRFVNRLDMNTSGLVIVAKNAYAHHVLSKDMSDDKVIKRYITVVNGVVEN
DEGTINQPIYRPTEDSIKRVVDERGQASVTHYKVLERLNNATVLEVKLETGRTHQIRVHM
NFIGHGIIGDELYGYVNEDLINRQALHAYSLEFMQPRTKEILEFKAEIPNDMKDLIEKLR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaataaaaaagatcaaaagtataatttaatatcatatataaatgaagaagattta
accttaaaagagatattattagataaattaaatttctcagtaagatccctatcaaaaatg
aaaagagaaaaatcggtattagtaaatggagaatttaaaaagctaagctcgaatatagta
aagggagatttaatagaagttagaatagatgaagatatggctaattttgagcctcaagat
ttaaatttaaacataatatatgatgattttgatataattatggtaaataagccgcctttt
atggtggttcacccgactaaaagtcattttgataaaactattgcaaatggtgtaactgat
tacataataaaaaagaatgaaaaagtaaaggtaagatttgtaaatagattagatatgaat
acctctggtcttgttatagttgcaaagaatgcttatgctcaccatgtactatcaaaagat
atgagtgatgataaggttattaaaagatatataacagttgtaaatggtgtagttgaaaat
gatgaaggaactataaatcagccaatatatagacctactgaagatagtataaaaagagtt
gttgatgaaagaggtcaagcatctgtaactcattataaagtattggaaagattaaataat
gctacagttttagaggtaaaactagaaactggtagaacacatcaaataagagttcatatg
aattttattggacatggtataataggagatgagctatacggttatgtgaatgaagaccta
ataaatagacaagcacttcatgcatatagcttagaatttatgcaaccaagaactaaggag
attttagagtttaaggcagaaattccaaatgatatgaaggatttaatagaaaaattaaga
tag
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