Romboutsia sp. CE17: HF520_02795
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Entry
HF520_02795 CDS
T06535
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03030
DNA replication
roc03410
Base excision repair
roc03420
Nucleotide excision repair
roc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF520_02795 (polA)
03410 Base excision repair
HF520_02795 (polA)
03420 Nucleotide excision repair
HF520_02795 (polA)
03440 Homologous recombination
HF520_02795 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roc03032
]
HF520_02795 (polA)
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_02795 (polA)
Enzymes [BR:
roc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF520_02795 (polA)
DNA replication proteins [BR:
roc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HF520_02795 (polA)
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HF520_02795 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF520_02795 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
XPG_I
Motif
Other DBs
NCBI-ProteinID:
QJA07932
UniProt:
A0A6H1WXK9
LinkDB
All DBs
Position
577446..580100
Genome browser
AA seq
884 aa
AA seq
DB search
MDKRLIIIDGNSIINRAFYALPEMSSKDGLKTNAIYGFTTMLFKIIDTYKPTHISVAFDR
KAPTFRHLEYKEYKAGRKKMPDELREQFEPLKELLDKFNIHRLELDGYEADDIIGTVSKL
GEENDYKVYIVTGDKDAIQLASDKTTTLITKKGVGEVEEYNFDSVMERYEMTPTQFIDLK
GLMGDKSDNIPGVPGIGEKTGIKLIKEFSSIENLVEHTEELKGSVKKKIEEHKDLAIMSK
RLATIMRDVPIEVKLEELEYGDYDKEAVVEEFKKFGFTSLISRLLDLNGGSEVSQENESV
NINVKPLEDVQALIKEINDKKSIIMKTVSKVGNILEKNILYVFISIDGENIYYIKEGQIE
EFREIFSSNEIKKFGYNLKDDYIALRSYDIDLENMYFDITIAEYLIDSASSTSYECSAIA
MKYLTRKMKSKEDLLGKGAKAKKFEDIEINELSEYIGQIINVVKWSSEIMEKYLSESDMD
SLFHEVEMPLVEVLGEMEYVGIEVDKSMLNELGAQFKEIISKLEAEIYEMAGESFNINSP
KQLGVILFEKLELPVIKKTKTGYSTNAEVLEKLRDKHEIIDKITEYRQIVKLNSTYVEGL
LGIINPISNRIHSSFNQTITTTGRISSTEPNLQNIPVKMEMGRNIRKVFIAGKDHKLVDA
DYSQVELRVLANMSGDPNMIDAFKHGEDIHSKTASQIFDVDINEVTSRQRSEAKAINFGI
VYGKSDFGLSEDLHIPVKQAKEYINSYFEKYSKIKEFMDNTIEDATQNGYITTLLNRRRY
IPELKSSNFMLRNAGKRAAMNAPIQGSAADIIKIAMVNVYKKLEEKNLKSKLILQVHDEL
IVEAYDDELEIVEKIVKEEMENAFSMDVHLDVDLNIGYSWYETK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaagattgattataatagatggaaactcaattataaatagagctttctacgca
ctgccagaaatgagtagtaaggatggattaaaaacaaatgcaatttatggttttacaaca
atgctatttaaaataatagatacatataaaccaactcatataagtgtagcttttgataga
aaggcacctacatttagacatttagagtataaagaatataaagctggaagaaaaaagatg
ccagacgaactaagagaacagtttgagccattaaaagaacttctagataagtttaatata
catagattagaactagatggttatgaagctgatgatataataggaacagtttcaaagcta
ggtgaagagaatgattataaggtttacatagtaacaggagataaggatgctattcagctt
gcttctgataaaacaacaactttaataactaaaaagggtgttggagaagttgaagaatat
aattttgattcagtaatggaaagatacgaaatgactcctactcaatttatagatttaaaa
ggtcttatgggagataagtcagataatataccaggcgtaccaggtataggagaaaaaact
ggaatcaaacttataaaagaattttcaagcatagaaaatttagttgaacatactgaagaa
ctaaaaggtagtgttaagaaaaaaatagaagaacataaagacttagctataatgagtaaa
agattagctactataatgagagatgttccaatagaagttaaattagaagaacttgaatat
ggtgattatgataaagaggctgtagtagaagaatttaaaaagtttggattcacaagcctt
atatcaagacttttagatttaaatggaggtagtgaagtatctcaagaaaatgaatctgtg
aatataaatgtaaaaccacttgaagatgtacaagctttaataaaggaaataaacgataaa
aaatcaataataatgaaaacagtaagtaaagtaggtaatatacttgaaaaaaatatacta
tatgtattcataagtattgatggtgaaaacatatattacataaaagaaggacaaatagaa
gagtttagggaaattttctcaagcaatgagattaagaagtttggatataatttaaaggat
gattatatagctcttaggtcttatgatatagatcttgagaatatgtactttgatataaca
attgccgaatacctaatagattcagcatcatcaacttcttatgaatgtagcgctattgcg
atgaaatacctaactagaaaaatgaaatctaaggaagacttattaggcaaaggagctaag
gctaagaagtttgaagatatagaaataaacgagttatcagaatatataggacagataata
aatgtcgtaaaatggtcttcagagataatggaaaagtatttaagtgaaagtgatatggat
agtttattccatgaggtagaaatgccgctagttgaagttttgggagaaatggaatatgta
ggtatagaagtagataaatctatgcttaatgaattaggggctcaatttaaagaaattata
agtaaattagaagcagagatttatgaaatggctggagaatcatttaatataaattctcca
aaacaattaggagtgattttatttgaaaagttagaactacctgtaataaagaaaacaaaa
acaggttattcaactaatgctgaagttttagaaaaattaagagataaacatgaaataata
gataaaattacagagtatagacaaattgtaaaattaaattcaacttatgttgaagggctt
ctaggaataataaatcctataagtaatagaatacattcatcatttaaccaaactataact
acaacaggtagaatttcatcaacagaaccgaatcttcaaaatataccggtaaaaatggag
atgggaagaaatataagaaaagtatttatagcaggaaaagaccataagctagttgatgcc
gattattcacaagtagaattaagagtacttgcaaatatgagtggagatcctaatatgata
gatgcctttaaacacggagaagatatacactctaaaactgcatctcaaatttttgatgta
gatataaatgaagtaacatctagacaaagaagtgaagcaaaggctataaattttggtata
gtttatggtaaaagtgattttggtctatctgaagatttacatatacctgtaaaacaagct
aaagaatatataaatagttattttgaaaaatatagtaaaataaaagagtttatggataat
actatagaggatgctacacaaaatggatacataacaacattattaaatagaagaaggtat
atacctgagctaaaatcaagtaactttatgctaagaaatgcaggaaaaagggctgctatg
aatgcacctatacaaggtagtgcagcagatataataaaaatagctatggtaaacgtatat
aaaaaattagaagaaaaaaatcttaagtcaaagcttatattacaagtacacgatgaactt
atagtagaagcgtatgatgatgaattagaaatagttgaaaaaatagtaaaagaagaaatg
gaaaatgcatttagtatggatgttcatttagatgtagaccttaacatagggtactcttgg
tatgaaacaaagtag
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