Romboutsia sp. CE17: HF520_03135
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Entry
HF520_03135 CDS
T06535
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03030
DNA replication
roc03430
Mismatch repair
roc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF520_03135 (holA)
03430 Mismatch repair
HF520_03135 (holA)
03440 Homologous recombination
HF520_03135 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roc03032
]
HF520_03135 (holA)
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_03135 (holA)
Enzymes [BR:
roc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF520_03135 (holA)
DNA replication proteins [BR:
roc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF520_03135 (holA)
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF520_03135 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
ILEI
Motif
Other DBs
NCBI-ProteinID:
QJA07992
LinkDB
All DBs
Position
648677..649720
Genome browser
AA seq
347 aa
AA seq
DB search
MNYKDIIKSVNNRDLKNIYLFYGREFYLIENSINLFKGILNESMLDFNLDVIDGKEIVLD
QVISSIETLPFMDERKIVIIKDFELLKGKKKNFTDSDEKYLIEHLDNIPESTILIFAVYG
DIDKRKNIVKKISKNGIICNCDKLSDMDLFKWVKKKFEARDVIIENAQVMYFIDSEGYRD
KSSDKTLSDLDNEINKISSFVGKGNLITNEVIDKLSQKKVENDIFKLIDYIGEKNPSNAI
RILNDMIQEGESVLGIFAMIAKQFRIVMQVRQFQIEGYTSKVIAEKLKLHPFVVGKALKQ
ASNFSDDMIIDMLNYILESDYKIKNGLIKDTLAIEILVSKYCQRKIS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaaggatattataaagagtgtcaataatagagatttaaaaaatatatatctt
ttttatggtagagaattttatcttatagaaaattcaataaatttatttaaaggaatttta
aatgaaagtatgttggattttaacttagatgttatagatggaaaagaaattgttttagat
caagtaataagctcaatagaaacacttccttttatggatgaaagaaaaatagttataata
aaagattttgagctattaaaaggaaaaaagaaaaactttacagatagtgatgaaaaatat
ttaatagagcatttggataatataccagaaagcacaattttaatatttgctgtatatggt
gatatagataaacgaaaaaatatagtaaaaaagataagtaagaatggcataatttgcaat
tgtgataaattatctgatatggatttgtttaaatgggtaaagaaaaagtttgaagcaaga
gatgttataatagaaaatgctcaagttatgtattttattgattctgaaggatatagagat
aaaagcagtgataaaacattatctgatttagataatgaaataaataaaattagttcattt
gtaggtaagggcaatttaattactaatgaagttatagataagttatctcaaaaaaaagta
gaaaatgatatatttaagcttattgattacataggtgaaaaaaatccgtctaatgctatt
agaatattgaatgatatgattcaagaaggagagtctgttcttggtatatttgctatgata
gctaaacaatttagaatagttatgcaagtgagacaatttcaaatagaagggtatactagt
aaagttatagctgaaaagcttaagttacatccatttgtagtaggaaaagcgttaaaacaa
gcatcaaatttctctgatgatatgattattgatatgttaaattatattctggagagtgat
tacaaaataaaaaatggactgataaaggataccttagctatagagatacttgtgagtaag
tattgccaaagaaaaattagttaa
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