Romboutsia sp. CE17: HF520_03295
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Entry
HF520_03295 CDS
T06535
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roc03000
]
HF520_03295
Transcription factors [BR:
roc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
HF520_03295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_PafC
HTH_DeoR
GntR
HTH_Mga
HTH_24
MarR
Dimerisation
CggR_N
DUF977
HTH_20
Sigma70_r4
HTH_5
Rrf2
Put_DNA-bind_N
HrcA_DNA-bdg
HTH_65
Motif
Other DBs
NCBI-ProteinID:
QJA08023
UniProt:
A0A6H1WXX5
LinkDB
All DBs
Position
679938..680573
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AA seq
211 aa
AA seq
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MIIIQLNQRQLKIIDIVKENEPITSESIAASLNVTRATLRSDLAILTMTGILDARPKVGY
FYSGVSDLNLVGNGIKDKKAEDIMSMPVIVKQDISIYDVIVNMFLSDVGSIFITDDNENL
CGVVSRKDLLKATIGGSDINRIPIGMIMTRTPNVITANRDEDILLVIKKIIEHEVDSLPV
VENNEDGMKLRVVGRISKTSITKLFLEMLDN
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgattattattcaacttaatcaaagacagttaaagataatcgatatcgtcaaagaaaat
gaacctataactagtgaaagtattgctgcaagtttgaatgtgacacgtgctacactaaga
tcagatttagcaatattaactatgactggaatattagatgcaagacctaaggtgggatat
ttttactcaggtgtaagtgatttaaatttagttggtaatggtataaaagataaaaaggca
gaagatataatgagtatgccagtaatagtaaagcaagatataagtatatatgatgtaata
gttaacatgttcttatctgatgtagggagtatatttataactgatgataacgaaaattta
tgtggagtagtttctagaaaagatttattaaaagcaactataggtggatctgatataaat
aggattcctataggtatgataatgactagaactccaaatgtaatcacagctaatagagat
gaagatattttattagttataaagaaaatcatagagcatgaagttgattcattaccagta
gttgaaaataacgaagatggaatgaagttgagagtagttggaagaatctcaaagacaagt
ataacaaagttatttttagagatgcttgacaactaa
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