Romboutsia sp. CE17: HF520_03380
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Entry
HF520_03380 CDS
T06535
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03030
DNA replication
roc03430
Mismatch repair
roc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF520_03380
03430 Mismatch repair
HF520_03380
03440 Homologous recombination
HF520_03380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roc03032
]
HF520_03380
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_03380
Enzymes [BR:
roc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF520_03380
DNA replication proteins [BR:
roc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF520_03380
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF520_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QJA08040
LinkDB
All DBs
Position
695287..695793
Genome browser
AA seq
168 aa
AA seq
DB search
MEEYVVVDLETTGLDPYKGCEIIEIGVTEIVNNEIIRNYSRFVKPKKEIPTFITEITNIS
NEMVAHEDYIEEVLPRFRKYIGDRTIIAHNAKFDLKFLNFYLKELNLEPIKNHICTLELL
KKNKSYKGKNKKLETACAYYNIENKNAHRADSDTLATAKLFLIIKDEV
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatgtagtagttgacttagaaactacaggtttagatccttataaaggttgt
gaaataatagaaataggtgttacagaaattgttaataatgagattataagaaattattca
agatttgttaaacctaaaaaagaaataccaacttttataacggaaataactaatataagt
aacgaaatggtagcacatgaagattatatagaagaggttttacctagatttcgaaaatat
atcggcgacagaactataattgcccataatgctaaatttgatttaaagtttttaaatttt
tatttaaaagaattaaatttagaacctataaaaaatcatatatgtacattagagctactg
aagaaaaataaatcttataaaggtaagaataaaaagcttgaaacagcatgtgcatactat
aatatagaaaataaaaatgctcatagagcagatagcgatacactagcaacagctaagtta
tttctaataataaaagatgaagtttaa
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