Romboutsia sp. CE17: HF520_08795
Help
Entry
HF520_08795 CDS
T06535
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF520_08795 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roc03019
]
HF520_08795 (rny)
Messenger RNA biogenesis [BR:
roc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HF520_08795 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF7669
Motif
Other DBs
NCBI-ProteinID:
QJA10214
UniProt:
A0A6H1X417
LinkDB
All DBs
Position
complement(1841301..1842842)
Genome browser
AA seq
513 aa
AA seq
DB search
MDVIETIAICIVAIAVGVGVGYFVRKNISEAKIGQADQLAKEILDKAERDSETLQKEKLL
EAKEEIHKLRTDAERENKSRRNELQKFENRLVQKEETLDKKLQNLESKESSLNEKLKVVQ
AKEEEVDSIKNQQLEKLESISGITSDEAKEIILSKAERDVRREMSIMIKEIETQAKEEAE
KKSREIIGYAIQKCAADHVAETTVTVVNLPNDEMKGRIIGREGRNIRTLETATGIDLIID
DTPEAVILSGFDPIRREVARIALEKLIADGRIHPARIEEMVEKARKEVDNTIKEYGEQAT
FETAVHGLHPELVRLLGRLNYRTSYGQNVLKHSIEVAHIAGIMAAEIGADVKLAKRAGLL
HDIGKAVDHEMEGTHVEIGMDLLRRYRESKEVIHAMSTHHGDYEPQTIEAVLVTAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYEGVEKSFAIQAGREIRIMVKPENVTDEGMHLL
ARDMTKRIEDELEYPGQIKVSIIRETRAIEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtcatagaaacgatagcaatatgtatagtagcaatagctgttggtgtaggagtt
ggatattttgtaagaaaaaatatttctgaagcgaagattggtcaagcagatcaactagct
aaagaaattttagataaagcagaaagagactcggaaacattacaaaaagaaaagctatta
gaagctaaagaagaaattcataagttaagaacagacgcagagagagagaataagtctaga
agaaatgaattacaaaaatttgaaaatagattagtacaaaaagaagaaacattagataaa
aaattacaaaatttagaatctaaagaatctagtcttaatgaaaaattaaaagtagttcaa
gcaaaagaagaagaagttgattctattaaaaatcaacaattagaaaaattagaaagcata
tcagggataacatcagatgaagcaaaggaaataatattatcaaaagcagaaagagatgtt
agacgtgaaatgtctataatgataaaagaaatagaaactcaagctaaagaagaagctgag
aagaaatcaagggaaattataggttatgccatccaaaaatgtgcggcagatcatgtcgca
gagactactgttacagtggttaatttacctaatgatgaaatgaagggaagaatcataggt
agagaaggtagaaacataagaactttggaaacagcaactggaatagacttaataatagac
gatactccagaagcagtaattttatcaggattcgatccaataagaagagaagttgctaga
atagcgcttgaaaaacttatagcagatggaagaatacatcctgctagaatcgaagagatg
gtagaaaaagctagaaaagaagtagataatacaattaaagaatatggggagcaagcaact
tttgaaactgcagttcatggattacatccagaattagttagattattaggtagacttaac
tatagaactagttatggtcaaaatgtacttaaacactcaatagaagtagctcatatagct
ggtataatggctgctgaaataggtgcagatgtaaagttggctaaaagagctggtttactt
cacgatataggtaaggcagttgaccatgaaatggaaggaactcatgtggaaattggtatg
gatttacttagaagatatagagaatctaaagaagtaatacatgctatgagtactcatcat
ggagattatgaacctcagacaattgaagctgtactagttactgcagcagatgcaatatcg
gcagctagacctggtgcaagaagagaaactcttgaggcttatatcaagagattagagaag
ttagaagaaatagctaactcatatgaaggtgttgaaaaatcatttgcaatacaagctggt
agagaaattagaataatggtaaaaccggaaaatgtaacagatgaaggtatgcatttatta
gctagagatatgactaagagaatagaggatgaattagaatatccaggtcaaatcaaagtt
agtataataagggaaactagagcaatagaatacgcaaaataa
DBGET
integrated database retrieval system
