Romboutsia sp. CE17: HF520_08810
Help
Entry
HF520_08810 CDS
T06535
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roc03009
]
HF520_08810 (rimO)
Enzymes [BR:
roc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HF520_08810 (rimO)
Ribosome biogenesis [BR:
roc03009
]
Prokaryotic type
ribosomal protein modification factors
HF520_08810 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
PilO
NELF-A_N
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
QJA09043
UniProt:
A0A6H1X0U2
LinkDB
All DBs
Position
complement(1845121..1846458)
Genome browser
AA seq
445 aa
AA seq
DB search
MLKIALESLGCSKNLVDAEIMMGILNRKGYKLVGNMEEADIALVNTCGFIESAKQESIDT
ILEIAQLKETANLKLLIVTGCLAQRYSEELKAEIPEIDAIVGTGSYQNIDEIVAGLEKEN
KIVSLNDIEFAFNEELPRYVSTPSYMAYLKISEGCDKHCTYCIIPKLRGKQKSRKMEDII
SEAKDLASRGVKELVVIAQDSTTYGTDIYNGEAKLPQLLEELAKIEGIKWIRIMYSYPES
ITEELVQVIKKYDNICNYFDMPIQHASNRILKLMNRHTTKEDILAKIDMIRNNIPNATLR
TTIITGFPGETEEDFEELLDFAKEVKFDRLGAFAYSREEGTAADKLPDHIDENVKEQRRE
RLMILQQGISQEVMANKIGKTFEVLIEEQIEKNVYMGRTEGDAEEIDSIVYVKSKKQLHP
GDFVMVEINNALEYDLMGDVIDELA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagcacttgaatcattaggatgttcaaaaaacttagtagatgcagaaata
atgatgggtatcttaaataggaaaggatacaaattagtaggaaatatggaagaagctgat
atagctttagtaaatacttgtggatttatagagtcagctaaacaagaatcaatagacaca
atacttgaaattgcacaattaaaagaaacagcaaatttaaaacttcttatagtaacagga
tgcttagctcaaagatattcagaagagttaaaagcagaaataccagaaattgatgctata
gttggaactggaagttaccaaaatatagatgaaatagttgcaggacttgaaaaggaaaat
aaaatagttagtttaaatgatatagaatttgcttttaatgaagaacttccaagatacgtt
tcaacaccaagttatatggcatacttaaaaataagtgaagggtgtgataagcactgtact
tattgcataatacctaaactaagaggtaagcaaaaaagtagaaaaatggaagatataata
tcagaagctaaagacttagcatcaagaggtgttaaagaacttgtagtcatagcacaagat
agtacaacttatggaacagatatatacaatggagaagcaaaattacctcagttattagaa
gaattagctaaaattgaaggcataaagtggataagaataatgtattcatatcctgaatca
ataacagaagaattagttcaagttataaagaaatatgataatatatgtaactattttgat
atgccaatacaacatgcgagcaacagaatattaaaattaatgaatagacatacaacaaaa
gaagatatcttagctaagatagatatgataagaaataatatacctaatgcgacattaaga
actactataataactggattcccaggtgaaacagaagaagactttgaagaattattagat
tttgctaaagaagttaaatttgatagacttggagcatttgcatattcaagagaagaaggt
acagcagcagataaattaccagaccatatagatgagaatgtaaaagagcaaagaagagaa
agactaatgatattacaacaaggtatatctcaagaagttatggcaaataaaattggtaaa
acattcgaagttctaatagaagaacaaatagaaaagaatgtttatatgggaagaactgaa
ggcgatgcagaggaaatagatagtatagtttatgttaagtctaaaaagcaactacatcca
ggggacttcgtaatggtagaaattaataatgcattagagtatgatttaatgggagatgta
atagatgaacttgcctaa
DBGET
integrated database retrieval system
