Romboutsia sp. CE17: HF520_11155
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Entry
HF520_11155 CDS
T06535
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF520_11155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roc03019
]
HF520_11155
03009 Ribosome biogenesis [BR:
roc03009
]
HF520_11155
Enzymes [BR:
roc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HF520_11155
Messenger RNA biogenesis [BR:
roc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HF520_11155
Ribosome biogenesis [BR:
roc03009
]
Prokaryotic type
rRNA helicases
HF520_11155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QJA09482
UniProt:
A0A6H1X1Y8
LinkDB
All DBs
Position
complement(2322907..2324532)
Genome browser
AA seq
541 aa
AA seq
DB search
MNITKFEDLPISENIKRAIADMGFEEPSPIQAQSIPVILSGKDVIGQAQTGTGKTAAFSI
PILETIDPENKSLQAVVLCPTRELAIQVSKEIKKLSKYMHGIKSLPVYGGQPIDRQIKSL
KGGVQIIIGTPGRVIDHINRKTLKMDNVKMLILDEADEMLDMGFREDIEMILNKTPEDRQ
TTFFSATMPKGILDLTKKYQNNPEHIKIVRKEITVPNISQYYIETRNANKLEVLCRLIDV
YNPKLSVVFTNTKRGADELVSELQARGYFADALHGDLKQTQRDIVMDKFRQGTIDILVAT
DVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGRTGVSFSFVFGKEMRKMRDIER
YTKAKLVKHSIPSVADVEEKKVSAFFKEVKGIMDEGNLTKQLQWLEGFCNESDVEVIDVA
AALVKLALGHEEKEEIIEEPSRNRDKRDRNRKGSDTGAKDGMVRLFINVGRNQRVQAKDI
LGAIAGEAGISGKLIGTIDIYDKYTFVEVPKQNVKKVLESVKDTKIKGNKVNIEKANKKK
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaatataactaaatttgaagatttaccaattagcgagaacataaaaagggcaatagcg
gacatggggtttgaggaaccatcaccaatacaagcacaatcaatacctgtaatattatct
gggaaagatgttataggacaagcgcaaactgggacgggaaaaacagctgcgttcagtata
cctatattagaaacaatagacccagaaaataaaagtttacaagcagtagtactttgtcct
actagagaacttgctattcaggtttctaaagaaataaaaaaattatctaaatatatgcac
ggaataaaatcattaccagtttatggtggacaaccaatagatagacaaataaaatcacta
aaaggcggagtacaaataataataggaactccaggacgtgtaattgaccacataaataga
aaaacattaaaaatggacaatgtaaaaatgcttatattagatgaagcagatgaaatgtta
gacatgggattcagagaagatatagaaatgatattaaataaaactccagaagatagacaa
actacattcttctcagcaactatgccaaaagggatattagatttaactaaaaagtatcaa
aataacccagaacacataaagatagtaagaaaagagataactgtaccaaatatatcacaa
tactatatagaaacaagaaatgctaataagttagaagtattatgtagattaatagatgta
tacaaccctaagttgtcagtagtatttactaatacaaaaagaggtgctgatgagctagta
agtgaattacaagctagaggttactttgcagatgctttacacggagatttaaagcaaact
caaagagatatagtaatggataagtttagacaaggtactatagatatattagttgctaca
gatgttgcagcaagaggtatagatgtagatgatgttgaagcagtatttaactatgactta
ccacaagatgaagaatactatgttcacagaataggtagaactggtcgtgcaggtagaaca
ggagtatctttcagtttcgtatttggaaaagaaatgagaaaaatgagagatatagaaaga
tatactaaggctaaattagtgaaacatagtataccatcagtagctgacgttgaagaaaag
aaagtcagtgctttcttcaaggaagttaaaggaataatggatgaaggtaatttaactaag
caattacaatggttagaaggattctgtaatgaatctgatgttgaagttatagatgtagct
gcagcattagtgaagttagcattaggtcatgaggaaaaggaagaaataatagaagaacca
tcaagaaatagagataaaagagatcgcaacagaaaaggatcagatactggtgctaaagat
ggaatggttagattatttataaacgttggtagaaaccaaagagttcaagcaaaagatata
ttaggtgctatagctggtgaagctggaatatctggtaagttaataggaactatagatata
tatgacaaatatactttcgttgaagtacctaagcaaaatgttaagaaagtattagaaagt
gttaaagatacaaaaataaaaggaaataaagttaatatagaaaaagcaaataagaaaaag
aaataa
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