Romboutsia sp. CE17: HF520_11590
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Entry
HF520_11590 CDS
T06535
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roc03009
]
HF520_11590 (rlmD)
Enzymes [BR:
roc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HF520_11590 (rlmD)
Ribosome biogenesis [BR:
roc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HF520_11590 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
N6_N4_Mtase
Cons_hypoth95
PCMT
FtsJ
Met_10
PrmA
Methyltrans_SAM
Methyltransf_32
Methyltransf_11
UPF0020
DREV
Motif
Other DBs
NCBI-ProteinID:
QJA09563
UniProt:
A0A6H1X2A8
LinkDB
All DBs
Position
complement(2425477..2426832)
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AA seq
451 aa
AA seq
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MKRKDIIEFEVDKMEFGGTTVSMLDNREIHMKGGISGQKVKAVVKKARSKKAEVKMLEVL
EKSPIETATPCKHFGECGGCTILSVPYEKQLEIKERQVMDLFLQQDIFGFQFLGIEGSPN
DRLYRNKMEYTFGDEMKDGPLTLGLHKKGRHIDILTVDGCYLVDQDFIKVLTSTVKYFDE
KKLPYYRTMSHKGYLRNLVVRKGINTNELMVNIVTSSQEDFDMTEYKNMLINLDTEAEIV
SILHTINDGLADAVQCDELRILHGRDYINEELLGLKFTISPFSFFQTNTKGAEKLYTIAR
EFVGDHENKIVFDLYSGTGTIGQVMAGAAKKVYGIELIEEAVVAANNNAKLNGLTNCEFV
AGDVAKTVKNFKVKPDLIIVDPPRPGVHKDAIRDISGFGAKEIVYISCNPKTLVLDLVEF
KNYGYEVEKVKCMDMFPNTPHVETCVKLIKK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagaaaagacataattgaatttgaagtagataaaatggagttcggtggaactact
gttagtatgttagataatagagaaatccacatgaagggcggaataagtggacaaaaggtt
aaagcagtagtaaagaaagctagaagtaaaaaggctgaagtgaaaatgttagaagtatta
gagaaatctccaatagaaacagctactccttgtaagcattttggtgaatgtggaggatgt
acaatattatctgtaccatatgaaaagcaacttgaaataaaagaaagacaagttatggat
ttattcttacagcaagatatatttggattccaatttttaggtatagagggaagtccaaat
gatagactatatagaaataaaatggaatatacttttggggatgaaatgaaggatggtcct
cttacactaggtcttcacaaaaaaggtagacatatagatattttaactgttgatggttgt
tatttagtagaccaagactttataaaagtattaacttcaactgtaaaatattttgatgaa
aagaaattaccatattatagaactatgagccataaaggatatttaagaaaccttgttgtt
agaaaaggtataaatactaatgaactaatggttaatatagttacatcatctcaagaagat
tttgatatgactgaatacaaaaatatgttaataaatcttgatacagaagcagagatagtt
agtatattacacactataaatgatggacttgctgatgcggttcaatgtgatgaactaaga
atattacacggaagagattatataaatgaagagttattaggtcttaagtttacgatatct
ccattttcattcttccaaactaatactaagggagcagagaaactttatactatagcgaga
gaatttgtaggagatcatgaaaataaaatagtatttgacttatatagtggaactggaaca
ataggacaagttatggcaggtgctgctaaaaaagtttatggtatagaattaatagaagaa
gcagtagtagcggctaataataatgccaagttaaatggattaactaactgtgaattcgtg
gcaggagatgtagcaaaaactgttaagaactttaaagtaaaacctgacttaataatagtt
gatcctccaagaccaggtgttcataaagatgcaataagagatatatcaggatttggtgct
aaagaaatagtttatatttcatgtaatccaaagactttagttttagacttagttgaattt
aaaaattatggatatgaggtagaaaaagttaagtgtatggatatgttccctaatactcct
catgttgaaacttgtgttaaattaataaaaaaataa
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