Romboutsia sp. CE17: HF520_11685
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Entry
HF520_11685 CDS
T06535
Name
(GenBank) DUF3553 domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03420
Nucleotide excision repair
roc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF520_11685
03430 Mismatch repair
HF520_11685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_11685
Enzymes [BR:
roc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF520_11685
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF520_11685
MMR (mismatch excision repair)
Other MMR factors
HF520_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DUF3553
PcrA_UvrD_tudor
AAA_11
DEAD
AAA_22
Sec3_CC
Helicase_RecD
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
QJA09582
UniProt:
A0A6H1X290
LinkDB
All DBs
Position
complement(2444492..2446720)
Genome browser
AA seq
742 aa
AA seq
DB search
MNLDTLNPAQREAVEKTEGPVLILAGAGSGKTRVLTTRIAHLMENKNVQAANILAITFTN
KAATEMRERVEETIKELDTKDMWITTFHSCCVRILRKGINRIGYNRSFVIYDSSDQVTLI
KDCLKELNLSDKVFEPKSVISTISGAKDKLYSPAQFKALYKDDVRNSKIADIYALYQDRL
KRNSALDFDDLIYKTVELFKEDPETLEFYRSRFKYIMVDEYQDTSKAQYELIKMLAKQHQ
NICVVGDDDQSIYGWRGADIRNILEFEKDYDDVHVVKLEQNYRSTQIILDAANTVISNNI
ERKRKKLWSEQKDGELIKIQLASDEMDEAEFIADTISRLKRRDRRNFRDFAVLYRANVQA
RPIEDALNRSQIPYNIYGGTKFYERKEIKDLIAYLRVIQNPQDDISLKRIINVPRRGIGL
RTIEKIEDRASLKQESLYSVLIDIESNSDISTKARASISGFVDLMGTLRTIKEVYPVSKL
IEKVLDTSGYLDELQKDSNKEEAEDRIENLKEFISVAIEFEQNSEEKDLETFLTTVALTS
ESSDDEEDDRVSLMTIHTSKGLEFPVVFLTGMEEKLFPIARAITSMRDSDIEEERRLCYV
GITRAKEELYMTLTQRRTLYGKTNPSIASRFMEELPSECIERLNKSDNELSYSKANYNIL
DKYTKKYMNNIQKSSIAKKVNATVKDSTKETNIDDIKPGAKVHHPKFGVGTVVMMKGTDV
TIAFDNQGLKTINKEYTTLDLL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatacattaaatcctgcccagagggaagctgtagaaaaaacagaaggccct
gtacttatactggcaggagcaggatcgggaaaaactagagttctaacaactagaatagct
catttaatggaaaataaaaatgttcaagctgcaaatatattagctataacatttacaaac
aaagctgctacagaaatgagagagagagtagaagaaacaattaaagaacttgatacaaag
gacatgtggataacaacattccactcttgttgtgtacgaatactaagaaaaggaataaat
agaataggatacaatagaagttttgttatttatgatagctcagatcaggtaacactaata
aaggattgtttaaaagagttaaacttaagtgataaggtattcgaacctaagtcggttata
agtactatatcaggagcgaaggataaattatatagtcctgcacaatttaaggcattatat
aaggatgatgtaagaaactctaagatagctgatatatacgcactatatcaagatcgtcta
aaaagaaatagtgcactagactttgatgatttaatatacaaaactgttgaattatttaaa
gaagatccagaaacgctagaattctatagaagtagattcaaatatataatggttgatgag
tatcaagatacaagtaaggctcagtatgaattaataaagatgctagcaaaacaacatcaa
aacatatgtgttgttggtgacgatgaccaaagtatatatggctggagaggtgctgatata
agaaatatacttgagttcgaaaaagactatgatgatgttcatgtagtaaagctagagcaa
aattatagatcaactcagattatacttgatgcagcaaacactgttatatctaacaatata
gaaagaaaaagaaaaaaactttggagcgaacaaaaagacggagagttaattaagatacag
ttagcatcagatgaaatggatgaagcagaattcatagcggatactatatcaagattaaag
agaagagatagaagaaactttagagactttgcggttctttatagagcaaatgtacaagcg
cgtccaattgaagatgctttaaatagaagtcaaattccatataatatatatggcggaact
aagttctatgaaaggaaagaaataaaggatttaattgcttatttaagagttatacaaaat
ccacaagatgatatatctttaaagaggattataaatgttcctagaagaggtataggcctt
agaactatagaaaaaatagaagatagagcaagcttaaagcaggaaagtttatattccgtc
cttatagatatagaaagtaattccgatatatcaacaaaagctagagcgagtataagtgga
tttgttgatttaatgggaactttaagaacaataaaagaagtatatcctgttagtaagcta
atagaaaaggtactagatacatctggatatttagatgaattacaaaaagatagtaataaa
gaagaagctgaagatagaatagaaaacttaaaagaattcatatctgtagccatagaattt
gaacaaaatagcgaagaaaaagatttagagacattcttaacaacagtggcacttacatca
gaatctagtgatgatgaagaagatgatagggtatctttaatgacaattcatacatctaaa
ggattagaattccctgttgtattcttaacaggtatggaggaaaaattattcccaatagca
agagctattacatctatgagggattctgatatagaagaggaaagaagactttgctatgtt
ggtataacaagggcaaaagaagagttatatatgactttaactcaaagaagaacattgtat
ggaaaaacaaatccatctatagcatctagatttatggaagaattaccttctgaatgtata
gaaagacttaataaatcagataatgaattaagctattctaaagctaattataatatacta
gataaatatactaaaaagtatatgaataatattcaaaagtcatctatagctaaaaaagta
aatgcaactgtaaaagatagcacaaaagaaacaaacatagatgatattaagccgggggca
aaagttcatcaccctaagtttggtgttggaactgttgtcatgatgaaaggtacagatgta
acaatcgcttttgataatcaaggtttaaagactataaataaagaatacacaactttagac
ttattgtaa
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