Romboutsia sp. CE17: HF520_13230
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Entry
HF520_13230 CDS
T06535
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roc03032
]
HF520_13230 (gyrB)
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_13230 (gyrB)
Enzymes [BR:
roc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HF520_13230 (gyrB)
DNA replication proteins [BR:
roc03032
]
Prokaryotic type
DNA Topoisomerases
HF520_13230 (gyrB)
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HF520_13230 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QJA09819
UniProt:
A0A6H1X2X8
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All DBs
Position
2759001..2760902
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AA seq
633 aa
AA seq
DB search
MKQEYGASQIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALQGYCSQIYV
SINEDGSITVKDDGRGIPVEIHPKTGKSTLETVLTVLHAGGKFGGGGYKVSGGLHGVGVS
VVNALSEWLVAEVHRDGKIYKQTYAKGVTTSALEPVGESTNTGTIITFMPDATIFDEIEF
KYETLEYRLRELAFLNKGIKIVFEDKRSESPKKKEFYYTGGLVEYVKYLNKSRTGIHEDI
VYIDKKVKDCVVELAMQYTDGYTENIYSFANNINTHEGGTHLSGFKTALTKTINDYARRN
KLIKDSEPNLVGEDIREGLTAVISVKLPEPQFEGQTKTKLGNTVMRSIVDGVTVEELGAF
LEENPTTARIIVDKGLRAQRAREAAKRARELTRRKSVLESTSLPGKLADCAEKDPAKSEI
FLVEGDSAGGSAKQGRDRHTQAILPLRGKILNVEKSRLDKILSSDEIKNMITAYGCGVGN
DFDLEKLRYHKIVIMTDADVDGAHIRTLLLTFFFRYMRPLIEEGYVYIAQPPLYKVKKQK
KEYYVYSDAQLNTLLDEIGRQGVELQRYKGLGEMNAEQLWDTTMNPETRTLLQVSIEDAV
IADEVFSMLMGDKVAPRKEFIETNAKYVRNLDI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagaatacggtgcaagtcagatacaagtattagaaggattagaagccgttaga
aaaagacctggtatgtacattggttcaactggtccaagaggtttacaccatttagtttat
gaaatcgtagataacagtatagatgaagcattacaaggttattgttcacaaatatacgta
agcataaatgaagatggaagtataactgtaaaagatgatggtagaggtataccagtagag
atacatcctaaaactggaaaatctacattagaaacagtattaacggttcttcatgcagga
ggtaaattcggtggaggaggatacaaggtatctggtggtcttcacggagttggtgtttct
gtagttaatgctttatcagaatggttagttgctgaagtacacagagatggaaagatatat
aaacaaacttatgctaaaggtgtaactacatctgcattagaacctgtaggagagtcgact
aatactggaactataattacatttatgcctgatgcaacaatatttgatgaaatagaattc
aagtatgaaacattagaatatagacttagagaattagcattcttaaataaaggcataaaa
atagtatttgaagataagagaagtgaaagtcctaagaaaaaagaattttactatacaggt
ggattagttgagtatgtaaaatacttaaataaaagtagaacaggtatacatgaggacata
gtttatatagataaaaaggtaaaagattgtgtagttgaattggctatgcagtatactgat
ggttatacagagaacatatattcttttgctaataatataaatactcacgagggtggtact
cacttaagtggatttaaaacagcccttacaaaaactataaatgattatgcgagaagaaat
aaactaatcaaagatagtgaacctaacttagtaggtgaagatataagagaaggacttaca
gctgttatatctgttaagcttccagaaccacaattcgaaggacaaactaaaactaaactt
ggaaatacagtaatgagaagtatagttgatggtgtaactgtagaagagttaggtgctttc
ttagaagaaaatccaactacagctagaataatagttgataaaggtcttagagctcaaaga
gcgagagaagctgcaaaaagagctagagaattaactagaagaaagagtgtgcttgaaagt
acttcattacctgggaaattagctgactgtgctgaaaaagacccagcgaagagtgaaata
ttcttagtcgaaggggattctgccggtggttctgctaaacaaggtagagatagacatact
caagcaatattaccattaagaggtaaaatacttaatgttgaaaaatctagattagataaa
atattatcttctgatgaaataaagaatatgataactgcgtatgggtgtggtgtaggaaat
gattttgatttagaaaagttaagataccataagattgtaatcatgaccgatgccgatgtc
gatggtgctcacataagaacgttattattgacattcttcttcagatatatgagacctctt
atagaagaaggatatgtgtatatagcacaaccacctttatataaagttaaaaagcaaaag
aaagaatactatgtttattctgatgcacaattaaatactttattagatgaaattggtaga
caaggtgtagagcttcaaagatataaaggtcttggagagatgaacgcagagcaattatgg
gatacaactatgaatccagaaactagaactttactacaggtatctatagaagatgcagta
attgcggatgaagtattctctatgcttatgggagataaggtagctcctagaaaagaattt
atagaaactaacgctaaatacgttagaaacttagatatataa
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